Bubalus bubalis (water buffalo): 102399580 Help Entry 102399580         CDS       T05912                                  Symbol TRAF6 Name (RefSeq) TNF receptor-associated factor 6   KO K03175   TNF receptor-associated factor 6 [EC:2.3.2.27] Organism bbub  Bubalus bubalis (water buffalo) Pathway bbub04010   MAPK signaling pathway bbub04064   NF-kappa B signaling pathway bbub04120   Ubiquitin mediated proteolysis bbub04140   Autophagy - animal bbub04144   Endocytosis bbub04380   Osteoclast differentiation bbub04517   IgSF CAM signaling bbub04620   Toll-like receptor signaling pathway bbub04621   NOD-like receptor signaling pathway bbub04622   RIG-I-like receptor signaling pathway bbub04657   IL-17 signaling pathway bbub04722   Neurotrophin signaling pathway bbub04936   Alcoholic liver disease bbub05132   Salmonella infection bbub05133   Pertussis bbub05135   Yersinia infection bbub05140   Leishmaniasis bbub05142   Chagas disease bbub05145   Toxoplasmosis bbub05152   Tuberculosis bbub05160   Hepatitis C bbub05161   Hepatitis B bbub05162   Measles bbub05168   Herpes simplex virus 1 infection bbub05169   Epstein-Barr virus infection bbub05170   Human immunodeficiency virus 1 infection bbub05171   Coronavirus disease - COVID-19 bbub05200   Pathways in cancer bbub05222   Small cell lung cancer bbub05235   PD-L1 expression and PD-1 checkpoint pathway in cancer bbub05417   Lipid and atherosclerosis Brite KEGG Orthology (KO) [BR:bbub00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     102399580 (TRAF6)  09130 Environmental Information Processing   09132 Signal transduction    04010 MAPK signaling pathway     102399580 (TRAF6)    04064 NF-kappa B signaling pathway     102399580 (TRAF6)   09133 Signaling molecules and interaction    04517 IgSF CAM signaling     102399580 (TRAF6)  09140 Cellular Processes   09141 Transport and catabolism    04144 Endocytosis     102399580 (TRAF6)    04140 Autophagy - animal     102399580 (TRAF6)  09150 Organismal Systems   09151 Immune system    04620 Toll-like receptor signaling pathway     102399580 (TRAF6)    04621 NOD-like receptor signaling pathway     102399580 (TRAF6)    04622 RIG-I-like receptor signaling pathway     102399580 (TRAF6)    04657 IL-17 signaling pathway     102399580 (TRAF6)   09156 Nervous system    04722 Neurotrophin signaling pathway     102399580 (TRAF6)   09158 Development and regeneration    04380 Osteoclast differentiation     102399580 (TRAF6)  09160 Human Diseases   09161 Cancer: overview    05200 Pathways in cancer     102399580 (TRAF6)    05235 PD-L1 expression and PD-1 checkpoint pathway in cancer     102399580 (TRAF6)   09162 Cancer: specific types    05222 Small cell lung cancer     102399580 (TRAF6)   09172 Infectious disease: viral    05170 Human immunodeficiency virus 1 infection     102399580 (TRAF6)    05161 Hepatitis B     102399580 (TRAF6)    05160 Hepatitis C     102399580 (TRAF6)    05171 Coronavirus disease - COVID-19     102399580 (TRAF6)    05162 Measles     102399580 (TRAF6)    05168 Herpes simplex virus 1 infection     102399580 (TRAF6)    05169 Epstein-Barr virus infection     102399580 (TRAF6)   09171 Infectious disease: bacterial    05132 Salmonella infection     102399580 (TRAF6)    05135 Yersinia infection     102399580 (TRAF6)    05133 Pertussis     102399580 (TRAF6)    05152 Tuberculosis     102399580 (TRAF6)   09174 Infectious disease: parasitic    05145 Toxoplasmosis     102399580 (TRAF6)    05140 Leishmaniasis     102399580 (TRAF6)    05142 Chagas disease     102399580 (TRAF6)   09166 Cardiovascular disease    05417 Lipid and atherosclerosis     102399580 (TRAF6)   09167 Endocrine and metabolic disease    04936 Alcoholic liver disease     102399580 (TRAF6)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:bbub04131]     102399580 (TRAF6)    04121 Ubiquitin system [BR:bbub04121]     102399580 (TRAF6) Enzymes [BR:bbub01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      102399580 (TRAF6) Membrane trafficking [BR:bbub04131]  Endocytosis   Clathrin-mediated endocytosis    Ubiquitin E3 ligases     102399580 (TRAF6) Ubiquitin system [BR:bbub04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    TRAF proteins     102399580 (TRAF6) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TRAF-mep_MATH MATH_2 zf-TRAF TRAF6_Z2 zf-C3HC4_2 zf-C3HC4 zf-RING_UBOX zf-RING_2 zf-C3HC4_3 zf-C3HC4_4 zf-TRAF_2 zf-RING_5 Sina_ZnF TRAF3_RING RING_XB3-XBAT31 SlyX zf-RING_11 Spc29 U-box Med21 PspA_IM30 DUF16 DUF3450 DUF4455 DUF7607 ATG16 DUF7310 CCDC39 CENP-Q Motif Other DBs NCBI-GeneID:  102399580 NCBI-ProteinID:  XP_006062403 LinkDB All DBs Position 16:17905640..17926845 Genome browser AA seq 542 aa AA seqDB search MSLLHCENSCGSSQSESDCCAAMAASSCGTAAKDDSVGGTASTVTLSSSFMEEIQGYDVE FDPPLESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAGHKCPVDNEILLENQLFP DNFAKREILSLMVKCPNEGCLHKMELRHLEEHQAHCEFALMSCPQCQRPFQKCHLNIHIL KECPRRQVPCENCAVSMAFEDKEIHEQNCPLANVICEYCNTMLIREQMPNHYDLDCPTAP VPCTFSAFGCHEKMQRNHLARHLQENTQSHMRMMAQAVQTLSLAVAPVPQCTMPPYDSVP PTRPSSGRHSEVHNFQETIQQLEGRLVRQDHQIRELTAKMETQSMYVNELKRTIRTLEDK VAEIEAQQCNGIYIWKIGNFGMHLKSQEEEKPVVIHSPGFYTGKPGYKLCMRLHLQLPSA QRCANYISLFVHTMQGEYDSHLPWPFQGTIRLTILDQSEAAVRQNHEEIMDAKPELLAFQ RPTIPRNPKGFGYVTFMHLEALRQRTFIKDDTLLVRCEVSTRFDMGSLRREGFQPRSTDS GV NT seq 1629 nt NT seq  +upstreamnt  +downstreamnt atgagtctgctacactgtgaaaacagctgtggatccagccagtccgagagcgactgctgc gccgccatggccgccagctcctgtgggactgcagcaaaagacgacagtgtgggtgggacg gccagcacggtgactctctccagctctttcatggaagagatccaggggtacgacgtggaa tttgacccacccctggaaagcaagtacgagtgccccatttgcttgatggctttgcgggaa gcggtgcagacaccttgcggccataggttctgcaaagcctgcatcatcaaatcaataagg gatgcaggtcacaaatgtccagttgacaatgaaatactgctggaaaaccaactatttcct gacaattttgcaaaacgagagattctttcgctgatggtgaaatgtccaaatgaaggttgt ttgcacaagatggaactgaggcatcttgaggagcatcaagcacactgtgagtttgctctt atgagttgtccgcaatgccagcgtccctttcagaaatgccatcttaatattcatattctc aaggagtgtccaaggagacaggttccttgtgaaaactgtgctgtatcaatggcatttgaa gataaagagattcatgagcagaactgtcctttggcaaatgtcatctgtgaatactgcaat accatgctcatcagagaacagatgcccaatcactatgatctagactgccctacagcccca gtcccatgcacgttcagtgcttttggttgccatgaaaagatgcagaggaatcacttggca cgccacctgcaagagaatacccagtcgcatatgagaatgatggcccaggctgttcagact ttaagcctcgcggtagctcctgtgcctcaatgtaccatgcctccgtatgactctgtgcct cccacccggccttcctctgggcgtcactcagaagtccacaatttccaagaaaccattcaa cagttagagggtcgccttgtaagacaagaccatcaaatccgggaactgactgcaaaaatg gaaacccagagcatgtatgtaaatgagctcaagcgaactattcgaacccttgaagacaaa gttgctgaaatagaagcacagcagtgcaatgggatttacatctggaagattggcaacttt gggatgcacttgaaatcgcaagaagaggaaaagcctgttgtcattcacagccccggattc tacacaggcaaacccggctacaaactgtgcatgcggctgcacctgcagctgccgagcgcg cagcgctgcgccaactacatatcgctctttgtccacacgatgcaaggggagtacgacagc cacctgccgtggcccttccaggggacaatacgccttaccatccttgaccagtctgaagca gctgtgaggcaaaaccacgaagaaataatggacgccaaaccagagctcctggcctttcag agacccaccatcccccggaaccccaagggttttggctacgtgacttttatgcatctggaa gccctcagacaaagaaccttcatcaaggatgacacgttattagtacgctgtgaggtctcc acccgcttcgacatgggcagtcttcggagggagggttttcagccacggagtaccgactca ggggtatag

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