Bubalus bubalis (water buffalo): 102399965
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Entry
102399965 CDS
T05912
Symbol
TRAF1
Name
(RefSeq) TNF receptor-associated factor 1 isoform X1
KO
K03172
TNF receptor-associated factor 1
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub04064
NF-kappa B signaling pathway
bbub04210
Apoptosis
bbub04668
TNF signaling pathway
bbub05200
Pathways in cancer
bbub05202
Transcriptional misregulation in cancer
bbub05203
Viral carcinogenesis
bbub05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09130 Environmental Information Processing
09132 Signal transduction
04064 NF-kappa B signaling pathway
102399965 (TRAF1)
04668 TNF signaling pathway
102399965 (TRAF1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
102399965 (TRAF1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
102399965 (TRAF1)
05202 Transcriptional misregulation in cancer
102399965 (TRAF1)
05203 Viral carcinogenesis
102399965 (TRAF1)
09162 Cancer: specific types
05222 Small cell lung cancer
102399965 (TRAF1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
TRAF_BIRC3_bd
XLF_CC
Motif
Other DBs
NCBI-GeneID:
102399965
NCBI-ProteinID:
XP_025138123
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All DBs
Position
3:complement(172022497..172045054)
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AA seq
414 aa
AA seq
DB search
MASGSASSPRPAPDENEFPFGCPPTACQDPPEPGPLCTVCLSEKVRNDEDRICPKCKGDD
TPSESPGSLLSQEKDHPEVAEAGVGCPFAGVGCSFKGSPKFVEEHEVTSQAAHLNLLLGF
MKQWKAQLGSGLGYGPMALERNLSDLQLQGAVEVAGDLEVDCYRAPCSESQDDLALHHFM
KEKLLTELEGKLCVFENIVAVLNKEVEASHLALAASIHQSQLDREHILSLEQRVLELQQT
LAQKDQALGKLEQSLRLVEEASYDGSFLWKITNVARRCHESACGRTASLFSPAFYTAKYG
YKLCLRLYLNGDGTGKRTHLSLFIVIMRGEYDALLPWPFRNKVTFMLLDQNNREHAIDAF
RPDLNSASFQRPQSETNVASGCPLFFPLNKLQSPKHAYVKDDTMFLKCIVETNT
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atggcctctggctcagccagcagcccccgcccggcccccgatgagaacgagttccccttt
gggtgcccccccaccgcctgccaggaccccccagagcccgggcctctctgcaccgtctgt
ctctctgagaaagtgaggaatgatgaggatcggatctgtcccaaatgcaaaggggatgac
accccgtctgaaagtccaggaagccttctgtctcaggagaaggatcaccccgaggtggct
gaggctggagttgggtgcccctttgcaggtgttggctgctccttcaagggaagcccaaag
ttcgtggaggagcatgaggtcacctcccaggccgcccacctgaacctgctgttggggttc
atgaagcagtggaaggcccagctgggctctggcctggggtacgggcccatggccctggaa
cggaacctgtcagacctgcagctgcagggggccgtggaggtggctggggacctggaggtg
gactgctaccgggccccctgctccgagagccaggacgacctggccctgcatcacttcatg
aaggagaagctcctgaccgagctggaagggaagctgtgcgtgttcgagaacattgtcgcc
gtcctcaacaaggaggtggaggcctcccacctggccctggccgcctccattcaccagagc
cagctggaccgcgaacacatcctgagcctggagcagagggttctggagttgcagcagacc
ctggcccagaaggaccaggccttgggcaagctggagcagagcctgcgcctcgtggaggag
gcctcctacgacggcagcttcctctggaagatcaccaacgtcgcccggcggtgtcacgag
tcggcctgtggcaggaccgccagcctcttctccccagctttctacaccgccaagtatgga
tacaagctgtgcctgcggctgtacctgaatggggatgggacggggaagaggacccacctg
tccctcttcatcgtgatcatgagaggggagtacgatgctctgctgccatggcctttcagg
aacaaggtcaccttcatgctgctggaccagaacaaccgtgaacacgccatcgacgccttc
cggcccgacctgaactccgcttccttccagcggccccagagcgagaccaacgtggccagc
ggctgcccgctcttcttccccctcaacaagctgcagtcgcccaagcatgcctacgtgaag
gacgacaccatgttcctcaagtgcatcgtggagactaacacttag
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