Bubalus bubalis (water buffalo): 102401160 Help Entry 102401160         CDS       T05912                                  Symbol THBS1 Name (RefSeq) thrombospondin-1 isoform X2   KO K16857   thrombospondin 1 Organism bbub  Bubalus bubalis (water buffalo) Pathway bbub04015   Rap1 signaling pathway bbub04115   p53 signaling pathway bbub04145   Phagosome bbub04148   Efferocytosis bbub04151   PI3K-Akt signaling pathway bbub04350   TGF-beta signaling pathway bbub04510   Focal adhesion bbub04512   ECM-receptor interaction bbub04820   Cytoskeleton in muscle cells bbub05144   Malaria bbub05165   Human papillomavirus infection bbub05205   Proteoglycans in cancer bbub05206   MicroRNAs in cancer bbub05219   Bladder cancer Brite KEGG Orthology (KO) [BR:bbub00001]  09130 Environmental Information Processing   09132 Signal transduction    04015 Rap1 signaling pathway     102401160 (THBS1)    04350 TGF-beta signaling pathway     102401160 (THBS1)    04151 PI3K-Akt signaling pathway     102401160 (THBS1)   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     102401160 (THBS1)  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagosome     102401160 (THBS1)    04148 Efferocytosis     102401160 (THBS1)   09143 Cell growth and death    04115 p53 signaling pathway     102401160 (THBS1)   09144 Cellular community - eukaryotes    04510 Focal adhesion     102401160 (THBS1)   09142 Cell motility    04820 Cytoskeleton in muscle cells     102401160 (THBS1)  09160 Human Diseases   09161 Cancer: overview    05206 MicroRNAs in cancer     102401160 (THBS1)    05205 Proteoglycans in cancer     102401160 (THBS1)   09162 Cancer: specific types    05219 Bladder cancer     102401160 (THBS1)   09172 Infectious disease: viral    05165 Human papillomavirus infection     102401160 (THBS1)   09174 Infectious disease: parasitic    05144 Malaria     102401160 (THBS1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:bbub04131]     102401160 (THBS1)   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:bbub00536]     102401160 (THBS1) Membrane trafficking [BR:bbub04131]  Endocytosis   Phagocytosis    Opsonins     102401160 (THBS1) Glycosaminoglycan binding proteins [BR:bbub00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    102401160 (THBS1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TSP_C TSP_3 TSP_1 TSP1_spondin VWC TSP1_CFP_C EGF_3 cEGF TSP1_ADAMTS EGF_CA Laminin_G_3 Laminin_G_2 TSP1_CCN Laminin_G_1 Motif Other DBs NCBI-GeneID:  102401160 NCBI-ProteinID:  XP_025151721 LinkDB All DBs Position 11:complement(68067376..68083183) Genome browser AA seq 1170 aa AA seqDB search MGLAWGLGVLLLLHACGSNRIPESGGDNSVFDIFELTGAARKGSGRRLVKGPDPSSPAFR IEDANLIPPVPDKKFQDLVDAVRAEKGFLLLASLRQMKKTRGTLLAVERKDHSGQVFSVV SNGKAGTLDLSLTVQGKQHVVSVEEALLATGQWKSITLFVQEDRAQLYIDCEKMENAELD VPIQSIFTRDLASIARLRIAKGGVNDNFQGVLQNVRFVFGTTPEDILRNKGCSSSTSVFV TLDNNVVNGSSPAIRTDYIGHKTKDLQAICGISCDELSSMVLELRGLRTIVTTLQDSIRK VTEENKELANELRRPPLCYHNGVQYRTGDEWTVDSCTECRCQNSVTICKKVSCPIMPCSN ATVPDGECCPRCWPSDSADDGWSPWSEWTSCSVTCGNGIQQRGRSCDSLNNRCEGSSVQT RTCHIQECDKRFKQDGGWSHWSPWSSCSVTCGDGVITRIRLCNSPSPQMNGKPCEGKARE TKACQKDACPINGGWGPWSPWDICSVTCGGGVQKRSRLCNNPTPQFGGKDCIGDVTENQI CNKQDCPIDGCLSNPCFAGVQCTSYPDGSWKCGACPPGYSGDGVECKDVDECKEVPDACF NHNGEHRCENTDPGYNCLPCPPRFTGSQPFGRGVEHATANKQVCKPRNPCTDGTHDCNKN ANCNYLGHYSDPMYRCECKPGYAGNGIICGEDTDLDGWPNEDLLCVANATYHCRKDNCPN LPNSGQEDYDKDGIGDACDDDDDNDKIPDDRDNCPFHYNPAQYDYDRDDVGDRCDNCPYN HNPDQADTDNNGEGDACAADIDGDGILNERDNCQYVYNVDQKDTDMDGVGDQCDNCPLEH NPDQLDSDSDRIGDTCDNNQDIDEDGHQNNLDNCPYVPNANQADHDKDGKGDACDHDDDN DGIPDDRDNCRLVPNPDQKDSDGDGRGDACKDDFDQDKVPDIDDICPENVDISETDFRRF QMIPLDPKGTSQNDPNWVVRHQGKELVQTVNCDPGLAVGYDEFNAVDFSGTFFINTERDD DYAGFVFGYQSSSRFYVVMWKQVTQSYWDTNPTRAQGYSGLSVKVVNSTTGPGEHLRNAL WHTGNTPGQVRTLWHDPRHIGWKDFTAYRWRLSHRPKTGFIRVVMYEGKKIMADSGPIYD KTYAGGRLGLFVFSQEMVFFSDLKYECRDS NT seq 3513 nt NT seq  +upstreamnt  +downstreamnt atggggctggcctggggactcggtgtcctgctcctgttgcatgcctgtggctccaaccgc attccagagtctgggggagacaacagtgtgtttgacatctttgaactcaccggagctgcc cgcaagggctctgggcgccgactggtgaagggtcctgacccttctagcccagctttccgc atagaggatgccaacctgatcccccctgtgcctgacaagaagttccaagacctagtggat gctgtgcgggcggagaaaggtttcctcctcctggcctccctgaggcaaatgaagaagacc cggggtaccctgctggctgtggagcggaaagaccactctggccaggtcttcagcgtggtc tccaatggcaaggcaggcaccttggacctgagcctgaccgtgcaggggaagcagcacgtg gtgtcggtggaagaagcactcctggcgactggccagtggaagagcatcaccctgtttgtg caggaggacagggcccagctgtacatcgactgtgagaagatggagaatgcggagctggat gtccccatccagagcatcttcaccagggacctggccagcatcgccagactccgcattgcc aaaggaggtgtcaatgacaatttccagggggtgctgcagaatgtaaggtttgtctttgga accacaccagaagacatcctcaggaacaaaggctgctccagctctaccagtgtctttgtc acccttgacaacaacgtggtgaatgggtccagccccgccatccgcaccgactacattggc cacaagacaaaggacctgcaagccatttgtggcatctcatgtgacgagctgtccagcatg gtcctggagctcaggggtctacgcaccattgtgaccacgctgcaggacagtatccgcaaa gtgaccgaagagaacaaagagctggccaatgagctgaggaggcccccactctgctaccac aacggagtgcagtacaggactggcgacgagtggacggtggacagctgcactgagtgtcgc tgccagaactcagttaccatctgcaaaaaagtgtcctgtcccatcatgccctgctctaat gccacagttcccgatggagaatgctgcccacggtgctggcccagcgactctgcagacgat ggctggtccccgtggtctgagtggacctcttgctctgtgacctgtggcaatggaatccag cagcgtggccgctcctgcgacagcctcaacaacagatgcgagggctcctctgtgcagacg cggacctgccacatccaggagtgtgacaagagatttaaacaggatggcggctggagccac tggtccccatggtcatcttgctccgtaacatgtggagacggtgtgatcacaaggatccgg ctctgcaactcccccagcccccagatgaatgggaagccgtgtgagggcaaagcccgggag accaaagcctgccagaaagacgcctgccccatcaatggaggctggggaccctggtcacca tgggacatctgttctgtcacctgtggaggaggggtacagaaacgtagccggctctgcaac aaccccacaccccagtttggaggcaaggactgcattggtgatgtgacagaaaaccagatc tgcaacaagcaagactgtcccattgatggatgcctgtccaatccctgctttgctggtgtc cagtgtaccagctaccctgatggcagctggaagtgtggtgcctgtcccccaggctatagt ggagatggcgtcgagtgcaaagacgttgatgagtgcaaagaagtccctgatgcctgcttc aaccacaatggagagcacaggtgtgagaacacagaccccggctacaactgcctgccctgc ccaccgcgcttcactggctcgcagcccttcggccggggcgtggaacatgccaccgccaac aagcaggtatgcaagccccgaaacccctgcacagacgggacacacgactgcaacaagaac gccaactgcaactacctgggccactacagcgaccccatgtaccgctgcgagtgcaagcct ggctacgccggcaacggcatcatctgcggggaggacacagacctggacggctggcccaac gaggacctgctgtgcgtggccaatgcaacttaccactgcagaaaggataattgccccaac cttcccaactcggggcaggaagactatgacaaggatggaatcggcgatgcctgcgatgat gacgatgacaatgataagattccagatgacagggacaactgtccattccattacaaccca gcccagtacgactatgacagagatgacgtgggagaccgctgtgacaactgcccgtacaac cacaacccagaccaggccgacacagataacaatggggaaggagacgcctgcgcagctgac attgatggggacggtatcctcaatgaacgggacaactgccagtatgtctacaatgtggac cagaaagacactgacatggacggggttggtgatcagtgtgacaactgccccctggaacac aatccagaccagctcgactctgactcggaccgcattggagacacctgtgacaacaatcag gatattgatgaagacggccaccagaacaacctggacaactgtccctacgtgcccaatgcc aaccaggctgaccatgacaaggatggcaaaggcgacgcctgtgaccatgatgacgacaat gatggcattcctgacgaccgggacaactgcaggctggtgcccaatcctgaccagaaggac tctgatggtgatggtcgaggtgatgcttgcaaagatgattttgaccaggacaaggtgcca gacattgatgacatctgtcccgaaaatgttgatatcagtgagactgatttccgccgattc cagatgattcctctagatcccaaagggacatcccagaatgaccctaactgggttgtacgc catcagggtaaagaacttgtccagactgtcaactgtgaccctggacttgctgtaggttat gacgaatttaacgccgtggacttcagcggcaccttcttcatcaacaccgagagggacgac gactatgccggctttgtgtttggctaccagtccagcagccgcttctatgttgtgatgtgg aagcaagtcactcaatcctactgggacaccaaccccacgagggctcaggggtactctgga ctttccgtaaaggttgtaaactccaccacggggcctggcgagcacctgcggaatgccctg tggcacacaggaaacacccctggccaggtgcgcacactgtggcatgaccctcgtcacatc ggctggaaagatttcactgcctacagatggcgtctgagccacaggccaaagacaggtttc atcagagtggtgatgtatgaagggaagaaaatcatggctgactcaggacccatctatgac aaaacctatgccggtgggagactaggcttgtttgtcttctcgcaagaaatggtgttcttc tccgacctgaaatatgaatgcagagattcctaa

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