Bubalus bubalis (water buffalo): 102402997
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Entry
102402997 CDS
T05912
Symbol
GGPS1
Name
(RefSeq) geranylgeranyl pyrophosphate synthase
KO
K00804
geranylgeranyl diphosphate synthase, type III [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub00900
Terpenoid backbone biosynthesis
bbub01100
Metabolic pathways
Module
bbub_M00367
C10-C20 isoprenoid biosynthesis, non-plant eukaryotes
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
102402997 (GGPS1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
bbub01006
]
102402997 (GGPS1)
Enzymes [BR:
bbub01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
102402997 (GGPS1)
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
102402997 (GGPS1)
2.5.1.29 geranylgeranyl diphosphate synthase
102402997 (GGPS1)
Prenyltransferases [BR:
bbub01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
102402997 (GGPS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-GeneID:
102402997
NCBI-ProteinID:
XP_025140316
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All DBs
Position
4:127504963..127518457
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AA seq
300 aa
AA seq
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MEKTQETVQRILLEPYKYLLQLPGKQVRTKLSQAFNHWLKVPEDKLQIIIEVTEMLHNAS
LLIDDIEDNSKLRRGFPVAHSIYGIPSVINSANYVYFLGLEKVLTLNHPDAVKLFTRQLL
ELHQGQGLDIYWRDNYTCPTEEEYKAMVLQKTGGLFGLAVGLMQLFSDYKEDLKPLLDTL
GLFFQIRDDYANLHSKEYSENKSFCEDLTEGKFSFPTIHAIWSRPESTQVQNILRQRTEN
IDIKKYCVHYLENVGSFEYTRNTLKELESKAYKQIDARGGNPELVALIKHLSKMFKEENE
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atggagaagactcaagaaaccgtccaaagaattcttctagaaccttataagtacttactt
cagttaccaggtaaacaagtgagaaccaaactttcacaggcgtttaatcattggctaaaa
gttccagaagacaagctacagattatcattgaagtgacagaaatgttgcataatgccagt
ttactcatcgatgatattgaagacaactcaaaactccgacgtggctttccagtggcacac
agtatctatggaattccatctgtcatcaattctgctaattatgtatattttcttggccta
gagaaagtcttaaccctcaatcacccggatgcagtaaagctctttacccgccagctttta
gaactccatcagggacaaggcctagatatctactggagggataattacacttgtcccacc
gaagaagaatataaagcaatggtgctgcaaaagacaggcggactatttggattagcagta
ggtctcatgcagttgttctctgattacaaagaagatttaaaaccactacttgatacactt
gggctctttttccaaattagggatgattacgctaatctacactccaaagaatacagtgaa
aacaaaagcttttgtgaagatctaacagagggaaagttctcattccctactattcatgct
atctggtcaaggccagaaagcacccaggtgcagaatatcttacgccagagaaccgaaaac
atagatattaaaaaatactgtgtacattaccttgagaatgtaggttccttcgaatacact
cggaatactcttaaagagcttgaatctaaagcctataaacaaattgatgctcgtggtgga
aaccctgagctagtagctctaataaaacacttaagtaaaatgttcaaagaagagaatgaa
taa
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