Bubalus bubalis (water buffalo): 102403465
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Entry
102403465 CDS
T05912
Symbol
SLIT1
Name
(RefSeq) slit homolog 1 protein
KO
K06838
slit 1
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub04360
Axon guidance
bbub04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
102403465 (SLIT1)
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
102403465 (SLIT1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
bbub00536
]
102403465 (SLIT1)
Glycosaminoglycan binding proteins [BR:
bbub00536
]
Heparan sulfate / Heparin
Axon guidance molecules
102403465 (SLIT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
EGF
Laminin_G_2
Laminin_G_1
LRRNT
hEGF
LRRCT
LRR_1
LRR_9
EGF_TEN
LRR_14
EGF_DL_JAG
EGF_3
EGF_Teneurin
LRR_EndoS
EGF_2
EGF_CA
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
102403465
NCBI-ProteinID:
XP_025130224
LinkDB
All DBs
Position
23:complement(18473532..18652012)
Genome browser
AA seq
1534 aa
AA seq
DB search
MALTPPRGPSALLVRPALWLLLWAAAWRLGATGCPALCTCAGTTVDCHGTGLRAVPKNIP
RNTERLELNGNNITRIHKNDFVGLKQLRVLQLMENQIGVVERGAFDDMKELERLRLNRNL
LHTLPELLFQNNQALSRLDLSENTIQAIPRKAFRGATDLKNLQLDKNQIGCIEEGAFRAL
RGLEVLTLNNNNITTIPVSSFNHMPKLRTFRLHSNHLFCDCHLAWLSQWLRQRPTIGLFT
QCSGPPGLRGLNVAEVQKSEFSCSGQGEAGRAPSCTLSSGSCPAMCACSNGIVDCRGKGL
TAIPANLPEAMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQISEIAPDAFQGLRSLN
SLVLYGNKITDLPQGVFGGLFTLQLLLLNANKINCIRLDAFQDLQNLSLLSLYDNKIQSL
AKGTFTSLRAIQTLHLAQNPFICDCNLKWLADFLRSNPIETSGARCASPRRLANKRIGQI
KSKKFRCSAKEQYFIPGTEDHQLNSECNSDVVCPHKCRCEASMVECSSLKLTKIPERIPQ
ATAELRLNNNEISILEATGMFKKLTHLKKINLSNNKVSEIEDGAFEGAASVSELHLTANQ
LESIRSGMFRGLEGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNQIATISPGAFDTL
QALSTLNLLANPFNCNCQLAWLGDWLRKRKIVTGNPRCQNPDFLRQIPLQDVASPDFRCE
EGQEEGGCLPRPQCPQECACLDTVVRCSNKHLQTLPKGIPKNVTELYLDGNQFTLVPAQL
STFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNSLQCIPPLAFQGLRSLRLLSLH
GNDISTLQEGIFADVTSLSHLAIGANPLYCDCHLRWLSSWVKTGYKEPGIARCAGPPDME
GKLLLTTPAKKFECQGPPTLTVQAKCDPCLSSPCQNQGTCRNDPLVGYRCACPSGYKGRD
CEVSLDSCSSSPCGNGGTCHSQEGEDAGFTCSCPTGFEGPTCGVDTDDCVEHSCANGGTC
VDGVGSYTCQCPLQYSGRACELLVDFCAPDLNPCQHEAQCVGTPDGPRCECAPGYAGGSC
TENQDDCRDHRCQDGAQCVDEANGYSCLCTQGYSGQLCETPPRPPAPRSPCEGTECQNGA
NCVDQGNGPVCQCLPGFGGPECEKLLSVNFVDRDTYLQFTDLQNWPRANITLQVSTAEDN
GILLYNGDNDHIAVELYQGHVRVSYDPGSYPSSAIYSTETINDGQFHTVELVTFDQMVNL
SIDGGSPMTMDNFGKHYTLNSDAPLYVGGMPVDVNSAAFRLWQILNGTSFHGCIRNLYIN
NELQDFTKTRMKPGVVPGCEPCQKLYCLHGICQPNATPGPVCHCEAGWGGLHCDQPADGP
CHGHKCVHGKCVPLDALSYSCQCQDGYSGALCNQAGAPADPCGGLRCLHGHCQASATKGA
HCVCDPGFSGELCEQESECRGDPVRDFHQVQRGYAICRTTRPLSWVECRGSCPGQGCCQG
LRLKRRKFTFECSDGTSFAEEVEKPTKCGCALCA
NT seq
4605 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgacacccccgagggggccctcggcgttgctcgtccggcccgcgctctggctg
ctgctgtgggcagccgcgtggcgcctgggtgccaccgggtgccccgccctctgcacctgc
gctggcaccacggtggattgccacggcaccgggctgcgggccgttcccaagaacatcccg
cggaacacggagcgcctggaactcaatggcaacaacatcactcgaatccacaagaacgac
ttcgtgggactcaagcagctgcgggtgctgcagctgatggagaaccagattggagtggtg
gaacgaggggcttttgatgacatgaaggagctggagcggctacgactcaaccggaacctg
ctgcacacgttaccagagctgctgttccagaataaccaggctctgtcgaggctggaccta
agtgagaacaccatccaggccatccccagaaaggctttccgtggagctacagatctcaaa
aatttacagctagacaagaaccagattggctgcattgaggaaggagctttccgggctctg
cgggggttagaggtgctgaccctgaacaacaacaacatcaccaccatccccgtgtccagc
ttcaaccacatgcccaagctgcggaccttccgcctgcactccaaccacctgttctgtgac
tgccacctggcctggctctcccagtggctgaggcaacggccaaccatcgggctcttcacc
cagtgctcgggcccccctggcctgcgcggcctcaacgtggctgaggtccagaagagtgag
ttcagctgctcaggccagggggaggcggggcgcgcgccctcctgcaccctctcctccggc
tcctgtccggccatgtgcgcctgcagcaacggcatcgtggattgtcgcggcaaaggcctg
accgccatccccgccaacctgcccgaggccatgacagagatccggctggagctcaacggg
atcaagtccatccccccgggggccttctctccctacagaaagctgcggaggatagacttg
agcaacaaccagatctcggagatcgcgcctgatgccttccagggcctccggtccctgaac
tcactggtcctctatgggaacaagatcacagacctcccccagggcgtgtttggaggcctg
ttcaccctacagctcctgctcctgaatgccaacaagatcaactgcatccggctcgatgcc
ttccaggatctacagaacctctcactgctctccctgtatgacaacaagatccagagtctt
gctaagggcaccttcacctccctgcgggccatccagaccctgcatctggcccagaacccc
ttcatctgtgactgtaacctcaagtggctggcagacttcctgcgctccaaccccatcgag
accagtggggcccgctgtgccagcccccgacgccttgccaacaagcgcatcggccagatc
aaaagcaagaagttccggtgctcagccaaagagcagtacttcattccaggcactgaggac
caccagctgaacagcgagtgcaatagcgacgtggtctgtcctcacaagtgccgctgtgag
gccagcatggtggaatgctccagcctgaagctcactaagatccctgagcgcataccccag
gccacggccgagctacgattaaacaacaatgagatttccatcctggaggccaccgggatg
tttaaaaaactcacccatctgaagaaaatcaacctgagcaacaacaaggtgtcggagatt
gaagacggggccttcgagggcgcagcctcagtgagcgagctgcacctgaccgccaaccaa
ctggagtccatccggagcggcatgttccggggcctggaaggcctgaggacgctgatgcta
aggaacaaccgtatcagctgcatccacaacgacagcttcacgggcctgcgcaacgtgcgc
ctcctctcgctctacgacaaccagatcgccaccatctccccgggagccttcgacacgctg
caggccctctccacgctaaaccttctggccaaccctttcaactgcaactgccagctggcg
tggctgggcgactggctgcgcaagaggaagatcgtgacggggaacccgcggtgccagaac
ccagacttcttgcggcagattcccctgcaggatgtggcctcccccgacttcaggtgtgaa
gaaggccaggaggaggggggctgcctgccccgcccgcagtgcccccaggagtgcgcctgc
ctggacaccgtggttcgatgcagcaacaagcacctccagaccctgcccaagggcatcccc
aagaatgtcacagagctctacctggacgggaaccagttcacgctggttccagcacagctg
tccaccttcaagtacctgcagcttgtggacctgagtaacaacaagatcagttccttaagc
aattcgtccttcaccaacatgagccagctgaccactctgatcctcagctacaactccctg
cagtgtatccctcctctggccttccaggggcttcgctccctgcgcctgctgtccctgcat
ggcaatgacatctccaccctccaagagggcatctttgcagatgtgacttccctgtctcac
ctggccattggtgccaaccccctgtactgtgactgccacctgcgctggttgtccagctgg
gtgaagacaggctacaaggaaccgggcattgcccgctgtgccgggcccccggacatggaa
ggcaaactgctccttaccacgcctgccaagaagtttgaatgccaaggtccccccaccctg
actgtccaggccaagtgtgacccctgcttgtccagcccgtgccagaaccagggtacctgc
cgcaacgacccccttgtggggtacaggtgtgcctgccccagcggctacaagggccgagac
tgtgaggtgtccctggacagctgttccagcagcccctgtggaaatggtgggacctgccac
tcacaggagggcgaggatgctggcttcacgtgctcctgccccaccggctttgaagggccg
acctgcggggtagacacggacgactgtgtggagcactcctgtgccaatgggggcacctgt
gtggacggcgtgggcagctacacctgccagtgcccgctgcagtactcgggaagggcctgt
gagctgctggtggacttctgcgctccagatttgaacccgtgtcagcatgaggcccagtgt
gtgggcacccctgatgggcccaggtgtgagtgtgcgccaggctacgcaggtggcagctgc
actgagaaccaggatgactgcagggaccaccgctgccaggatggggcccagtgtgtggac
gaagccaatggctactcctgcctctgtactcagggctacagtggtcagctctgtgagacc
cctcccagaccacctgcccccaggagcccctgtgaagggactgagtgccagaatggggcc
aactgtgtggaccagggcaacgggcccgtgtgccagtgcctcccaggctttggcggccct
gaatgtgagaagctgctcagtgttaacttcgtggatcgggacacctacctgcagttcaca
gacctgcagaactggccacgggccaacatcacgctgcaggtctccacggcagaagacaat
ggaatcctgctgtacaatggggacaacgaccacatcgcggtggagctctaccagggccat
gtgcgtgtcagttatgacccgggcagctaccccagctctgccatctacagcactgagacg
atcaacgatgggcagttccacacagttgagctggtcacctttgaccagatggtgaatctc
tccattgatggcggcagccccatgaccatggacaacttcggcaaacactacaccctgaac
agcgacgcccccctctatgtgggagggatgccggtagatgtgaattcggctgccttccgc
ctgtggcagatcctgaatggcaccagcttccatggctgcatccgaaacctgtacatcaac
aacgagttgcaggacttcaccaagacacggatgaagccaggcgtggtgccaggctgcgag
ccctgccagaaactctactgcctgcacggcatctgtcagcccaatgccaccccggggccc
gtgtgccactgcgaggccggctgggggggcctgcactgtgaccagccagccgacggcccc
tgccatggccacaagtgtgtccacgggaagtgcgtgcctctggatgctctttcctacagc
tgccagtgccaggatgggtactcaggggccctgtgcaaccaggctggggcacctgcagac
ccctgtgggggcctgcggtgcctgcatggccactgccaggcctcagccaccaagggggca
cactgtgtgtgtgaccccggcttttcgggcgagctgtgtgagcaagagtccgaatgccgg
ggggaccctgtccgggactttcaccaggtccagaggggctatgccatctgccggaccacg
cgcccgctgtcgtgggtagagtgccggggctcatgtccgggccagggctgctgccagggc
ctgcggctgaagcgaaggaagttcacctttgagtgcagcgacgggacctcttttgccgag
gaggtggagaagcccaccaagtgtggctgtgccctctgcgcgtag
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integrated database retrieval system
