Bubalus bubalis (water buffalo): 102407399
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Entry
102407399 CDS
T05912
Symbol
CACNA1F
Name
(RefSeq) voltage-dependent L-type calcium channel subunit alpha-1F
KO
K04853
voltage-dependent calcium channel L type alpha-1F
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub04010
MAPK signaling pathway
bbub04020
Calcium signaling pathway
bbub04022
cGMP-PKG signaling pathway
bbub04024
cAMP signaling pathway
bbub04260
Cardiac muscle contraction
bbub04261
Adrenergic signaling in cardiomyocytes
bbub04270
Vascular smooth muscle contraction
bbub04723
Retrograde endocannabinoid signaling
bbub04725
Cholinergic synapse
bbub04726
Serotonergic synapse
bbub04727
GABAergic synapse
bbub04911
Insulin secretion
bbub04912
GnRH signaling pathway
bbub04921
Oxytocin signaling pathway
bbub04924
Renin secretion
bbub04925
Aldosterone synthesis and secretion
bbub04927
Cortisol synthesis and secretion
bbub04929
GnRH secretion
bbub04934
Cushing syndrome
bbub04935
Growth hormone synthesis, secretion and action
bbub05010
Alzheimer disease
bbub05020
Prion disease
bbub05022
Pathways of neurodegeneration - multiple diseases
bbub05207
Chemical carcinogenesis - receptor activation
bbub05410
Hypertrophic cardiomyopathy
bbub05412
Arrhythmogenic right ventricular cardiomyopathy
bbub05414
Dilated cardiomyopathy
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
102407399 (CACNA1F)
04020 Calcium signaling pathway
102407399 (CACNA1F)
04024 cAMP signaling pathway
102407399 (CACNA1F)
04022 cGMP-PKG signaling pathway
102407399 (CACNA1F)
09150 Organismal Systems
09152 Endocrine system
04911 Insulin secretion
102407399 (CACNA1F)
04929 GnRH secretion
102407399 (CACNA1F)
04912 GnRH signaling pathway
102407399 (CACNA1F)
04921 Oxytocin signaling pathway
102407399 (CACNA1F)
04935 Growth hormone synthesis, secretion and action
102407399 (CACNA1F)
04924 Renin secretion
102407399 (CACNA1F)
04925 Aldosterone synthesis and secretion
102407399 (CACNA1F)
04927 Cortisol synthesis and secretion
102407399 (CACNA1F)
09153 Circulatory system
04260 Cardiac muscle contraction
102407399 (CACNA1F)
04261 Adrenergic signaling in cardiomyocytes
102407399 (CACNA1F)
04270 Vascular smooth muscle contraction
102407399 (CACNA1F)
09156 Nervous system
04727 GABAergic synapse
102407399 (CACNA1F)
04725 Cholinergic synapse
102407399 (CACNA1F)
04726 Serotonergic synapse
102407399 (CACNA1F)
04723 Retrograde endocannabinoid signaling
102407399 (CACNA1F)
09160 Human Diseases
09161 Cancer: overview
05207 Chemical carcinogenesis - receptor activation
102407399 (CACNA1F)
09164 Neurodegenerative disease
05010 Alzheimer disease
102407399 (CACNA1F)
05020 Prion disease
102407399 (CACNA1F)
05022 Pathways of neurodegeneration - multiple diseases
102407399 (CACNA1F)
09166 Cardiovascular disease
05410 Hypertrophic cardiomyopathy
102407399 (CACNA1F)
05412 Arrhythmogenic right ventricular cardiomyopathy
102407399 (CACNA1F)
05414 Dilated cardiomyopathy
102407399 (CACNA1F)
09167 Endocrine and metabolic disease
04934 Cushing syndrome
102407399 (CACNA1F)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
bbub04040
]
102407399 (CACNA1F)
Ion channels [BR:
bbub04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
102407399 (CACNA1F)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
CAC1F_C
Ca_chan_IQ
GPHH
PKD_channel
HemY_N
Motif
Other DBs
NCBI-GeneID:
102407399
NCBI-ProteinID:
XP_044792660
LinkDB
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Position
X:55482285..55509718
Genome browser
AA seq
1975 aa
AA seq
DB search
MSASEGGKDSTPEPSPANGTGPGPEWGLCPGPPASDGEISGASGLGTPKRKTQHSKHKTV
AVASAQRSPRALFCLTLANPLRRSCISIVEWKPFDILILLTIFANCVALGVYIPFPEDDS
NTANHNLEQVEYVFLVIFTVETVLKIVAYGLVLHPSAYIRNGWNLLDFIIVVVGLFSVLL
EQGPGRPGDTPHMGGKPGGFDVKALRAFRVLRPLRLVSGVPSLHIVLNSIMKALVPLLHI
ALLVLFVIIIYAIIGLELFLGRMHKTCYFLGSDIEAEEDPSPCASSGSGRACTLNQTECR
GRWAGPNGGITNFDNFFFAMLTVFQCITMEGWTDVLYWMQDAMGYELPWVYFVSLVIFGS
FFVLNLVLGVLSGEFSKEREKAKARGDFQKLREKQQLEEDLRGYLDWITQAEELDMEDPS
AAGNFGSVAEEGLAGHRPQLEELTNRRRGRLRWFSHSTHSTSSHASLPASDTGSMAETQG
DEEEEEGTLASCTRCLNKIMKTSVCRRLRRANRGLRASCRRAVKSNACYWAVLLLVFLNT
LTIASEHHGQPFWLTQIQEYANKVLLCLFTVEMLLKLYGLGPSVYVSSFFNRFDCFVVCG
GILETTLVEVGAMQPLGISVLRCVRLLRIFKVTRHWASLSNLVASLLNSMKSIASLLLLL
FLFIIIFSLLGMQLFGGKFNFDQTHTKRSTFDTFPQALLTVFQILTGEDWNVVMYDGIMA
YGGPFFPGMLVCVYFIILFICGNYILLNVFLAIAVDNLASGDAGTDKDKGREKITEETPQ
ENGALVPGGENEEEESAKNEGADMEEEEEEEEEEEEEVGAGHVELLQEVVPKEKVVPIPE
GSAFFCLSQTNPLRKACHTLIHHHIFTNLILVFIILSSVSLAAEDPIRAHSFRNHILGYF
DYAFTSIFTVEILLKMTVFGAFLHRGSFCRSWFNLLDLLVVSVSLISFGIHSSAISVVKI
LRVLRVLRPLRAINRAKGLKHVVQCVFVAIRTIGNIMIVTTLLQFMFACIGVQLFKGKFY
SCTDEAKHTPQECKGSFLVYPDGDVSRPLVRERLWVNSDFNFDNVLSAMMALFTVSTFEG
WPALLYKAIDANAEDKGPIYNYHVEISVFFIVYIIIIAFFMMNIFVGFVIITFRAQGEQE
YQDCELDKNQRQCVEYALKAQPLRRYIPKNPHQYRVWATVNSAAFEYLMFLLILLNTVAL
AMQHYEQTAPFNYAMDILNMVFTGLFTVEMVLKIIAFKPKHYFTDAWNTFDALIVVGSVV
DIAVTEVNNGGHLGESSEDSSRISITFFRLFRVMRLVKLLSKGEGIRTLLWTFIKSFQAL
PYVALLIAMIFFIYAVIGMQMFGKVALQDGTQINRNNNFQTFPQAVLLLFRCATGEAWQE
IMLASLPGSRCDPESDFGPGEEFSCGSNFAIAYFISFFMLCAFLIINLFVAVIMDNFDYL
TRDWSILGPHHLDEFKRIWSEYDPGAKGRIKHLDVVALLRRIQPPLGFGKLCPHRVACKR
LVAMNMPLNSDGTVTFNATLFALVRTSLKIKTEGNLEQANQELRIVIKKIWKRMKQKLLD
EVIPPADEEEVTVGKFYATFLIQDYFRKFRRRKEKGLLGTEAPPSTSSALQAGLRSLQDL
GPEMRQALTCDTEEEEGEEGQEGEEEHEDLETYTALMGSQPPSRRSSVISVSLPAGDKPP
DSLSPGPSDDDGGAPNSRQSNVPQSGSHAHRRSSGVLIFTIPEERSSQSKATKGQEKQDE
QEEVLSQHSGHDTLSYLDEQAGAPPRPILLPSHRPQRYVDGRQAPRRRLLPPTPAGRKPS
FTIQCLRRQGSCEDLPIPGTYHRGRNSGPSRAQGSWATPPQRGRLLYAPLLLVEEGAAGE
GYIGKSSSPLRTFTCLHVPGTHLDPSHGKRGSADSLVEAVLISEGLGLFARDPRFVALAK
QEIADACRLTLDEMDSAASDLLAQGTSSLYSDEESILSRFDEEDLGDEMACVHAL
NT seq
5928 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcatctgaaggcgggaaagacagcaccccagagcccagtccagccaatgggaca
ggccctgggcccgaatgggggctgtgccctgggcccccagcatcagatggtgaaatcagc
ggggcatcgggcctagggacccctaagcgaaagactcagcacagtaagcacaagacagtg
gcagtagccagtgcccagcggtcaccccgggcactcttctgcctcaccctggcaaacccc
ctacggcggtcctgcatcagcattgtggaatggaagcccttcgacatcctcatcttgctg
accatctttgccaattgcgtggccctgggagtctacatccccttcccagaggacgactcc
aacactgccaaccacaacctggagcaggtggaatacgtatttttggtgattttcactgtg
gagacggtgctcaagatcgtggcctacgggctggtgctccaccccagcgcctacatccgc
aacggctggaacctgctcgacttcatcattgtcgtggtcgggctgttcagcgtgctgctg
gagcagggtcccggacgcccaggggacaccccgcatatgggagggaagccagggggcttc
gatgtgaaggcattgcgggcatttcgggtgctgcggccactgaggctggtgtctggagtc
ccaagcctgcacatagtgctcaattccatcatgaaggctctggtgccgctgttgcatatt
gcacttcttgtgctctttgtcatcatcatttacgccatcattggactggagctgttcctc
ggacgcatgcacaaaacgtgctatttcctgggatctgacatagaggcggaggaggacccg
tcaccctgtgcgtcctcaggatcagggcgtgcttgcacactgaaccagacggagtgccgc
gggcgctgggcagggcccaacggaggcatcaccaactttgacaactttttcttcgccatg
ctgacagtcttccagtgcatcaccatggaaggctggaccgacgtgctctactggatgcag
gatgccatggggtatgagctgccctgggtatatttcgtgagtctcgtcatctttggatcc
ttcttcgtcctcaaccttgtacttggtgtcctgagtggggagttctccaaagagagggag
aaggcaaaggcacgaggggatttccagaagcttcgggagaagcagcagctggaggaggac
ctccggggctacctggactggatcacacaggcggaggagctggacatggaggacccctca
gctgctggcaactttggttccgtggctgaagagggcctggccggccaccggccacaactg
gaagagctgaccaataggagacgaggacgtctgcgctggttcagtcactccacccactcc
accagcagccatgccagcctcccagccagtgacaccggttcaatggcagagacccaagga
gacgaggaagaggaagagggcactctagccagctgtacacgctgcctaaataagatcatg
aaaaccagcgtttgccgccgtctccgccgagccaaccggggccttcgggcgagctgccgg
agggccgtgaagtccaatgcctgctactgggccgtgttgctgctcgtcttcctcaacact
ctgacaatcgcctcggagcaccacgggcagcccttctggctcacccagatccaggagtat
gccaacaaagtgctactctgtctgttcacggtggagatgcttctcaagttgtatggtctg
gggccctctgtctacgtgtcctccttcttcaaccgctttgactgcttcgtggtctgtggg
ggcatcctggagactaccctggtggaggtgggtgccatgcagcccctgggcatctcggta
ctccgctgtgtgcgcctcctcaggatctttaaggtcaccaggcactgggcatctctgagc
aatttagtggcatctctactcaattcaatgaaatccattgcatccttgctgcttctcctc
ttcctctttatcatcatcttctccctgcttggcatgcagctgtttgggggcaagttcaac
tttgaccagacccacaccaagcgaagcacctttgacacctttccccaggccctcctcact
gtctttcagatactgacgggtgaggactggaatgtggtcatgtatgatggtatcatggcc
tatggcggccccttcttcccagggatgctggtgtgcgtgtatttcatcatcctcttcatc
tgcggcaattacatcctattgaatgtgtttcttgccatcgctgtggacaacctggccagt
ggagatgcaggcactgacaaagataagggcagggagaagatcactgaggaaactccacag
gagaatggagcactggtgcctggtggggagaatgaggaagaggaatctgcaaaaaatgaa
ggagcagacatggaggaagaggaggaggaggaggaagaggaggaagaggaagtgggggcc
gggcatgtggaactcctgcaggaagttgtacccaaggagaaggtggtgcccattcctgag
ggcagtgctttcttctgcctcagccaaaccaacccgctgaggaaggcctgccacaccctc
atccaccatcacatcttcaccaatctcatcctggtgtttatcatcctcagcagtgtgtcc
ctggccgctgaggatcccatccgagcccactccttccgcaaccacattctggggtacttc
gattatgccttcacctccattttcactgtggagattctactaaagatgacagtgttcggg
gcttttctgcaccgtggttccttctgccgtagctggttcaatctgctggatctgctggtg
gtcagcgtgtccctcatctcctttggcatccactccagcgccatctcagtggtgaagatt
ctgcgtgtactccgagtactgcggccccttcgagctatcaacagggccaaaggactcaag
cacgtggtgcaatgtgtgttcgtggccatccggaccatcggaaatatcatgatcgtgacc
acgctcctgcagttcatgttcgcctgcattggtgtgcagctcttcaaggggaaattctac
agttgcactgatgaggccaaacacacaccccaagaatgcaagggctccttcctggtctac
cccgatggagatgtgtcaaggcctctggtccgggagcggctctgggtcaacagcgatttc
aactttgacaatgtcctttcagccatgatggccctgttcactgtctccaccttcgaaggc
tggcctgcgctgctatacaaggccattgatgcaaacgcagaggacaagggccccatctac
aattaccacgtggagatctcagtgttcttcattgtctacatcatcatcattgcattcttc
atgatgaacatctttgtgggctttgtcatcatcaccttccgagcccagggcgagcaggag
taccaagactgtgagctggataagaaccagcgccagtgtgtagaatatgccctcaaggcc
caaccactccgtcgctatatccccaagaacccacatcagtatcgtgtgtgggccactgtg
aactctgctgccttcgagtatctcatgttcctgctcatcctgctcaacacggttgctcta
gccatgcagcactatgagcagactgctcccttcaactatgccatggacatcctcaacatg
gtcttcactggcctcttcactgttgagatggtgctcaaaatcattgccttcaaacccaag
cattactttactgatgcctggaacacatttgatgctcttattgtggtgggcagcgtagtg
gacattgccgtcactgaagtcaataatggtggccacctgggcgagagctctgaggacagt
tcccgcatttcgatcaccttctttcgcctcttccgagtcatgcgattggtcaagcttctt
agtaagggtgaagggattcgcacattactttggacatttatcaagtcttttcaggcctta
ccctatgtggctcttctcatcgcaatgatattcttcatttacgcagtcattgggatgcag
atgtttggcaaggtggctcttcaggatggcacacagatcaaccgaaacaacaacttccag
acctttccacaggctgtactgcttttgttcaggtgtgctactggtgaggcatggcaggag
ataatgcttgccagccttcctggaagccggtgtgaccctgagtctgacttcggccctggt
gaggagtttagctgtggtagcaattttgccatcgcctattttatcagcttcttcatgctc
tgtgcattcctgatcataaatctctttgtggctgtgatcatggacaactttgattatcta
accagagattggtccatcctgggcccccatcacctcgatgaattcaagaggatttggtct
gaatatgaccctggggccaaaggccgcatcaagcacctggatgtggttgccctgctgaga
cgcattcagccccccctgggattcgggaagctgtgcccgcaccgagtggcctgcaagaga
cttgtggcgatgaacatgcccctcaactcagatgggacagtgacattcaatgccacactc
tttgccctggtccggacatcactgaagatcaagacggaaggaaacctggagcaagccaat
caggagctgcggattgtcatcaaaaagatctggaagcggatgaagcagaagctgctagat
gaggtcatcccaccagctgatgaggaagaagttaccgtgggcaaattctacgccacattt
ctgatccaggactacttccgcaaattccggcggaggaaagaaaaggggctactaggcacc
gaggcccccccaagcacctcctctgcccttcaggctggcctgaggagcctgcaagacttg
ggtccggagatgcggcaggccctcacttgtgacacagaggaagaggaaggggaagagggg
caggagggagaggaggaacacgaggacctggaaacgtacacagccctgatgggctcccag
cccccatctcgccggagctccgtgatttctgtgtctctacctgctggagacaaacctcca
gattcactttcccctggacccagtgatgacgatgggggggctcccaactccagacagtcc
aatgttccccagtctgggtcccatgcccacaggagaagctctggggttctcattttcacc
attccagaagaaagaagttctcagtccaaggcaaccaaagggcaagagaagcaggatgag
caagaggaagtcctgagccagcactctggccacgacacgctctcctacctagatgaacag
gcaggggctcccccacgccccatccttttgccatctcacagaccccagagatacgtggat
ggccgccaagcaccacgccgccgtctgctgcccccaacgcctgcaggtcggaagccatcc
ttcaccatccagtgtctgcggcgccagggcagctgtgaagatttacccatcccaggcacc
tatcatcgtggacgaaactcagggcccagtagggcacagggttcctgggcaacccctcct
cagcggggccgactcctatatgccccactgctattggtggaggagggtgcagcaggggag
ggatacatcggcaaatccagcagtccactgcgcaccttcacctgtctgcatgtgcctgga
acccacttggaccccagccatggcaaaaggggcagtgctgacagcctggtggaggctgtg
ctcatctctgagggcctgggcctctttgcccgagacccacgcttcgtggccctggccaag
caggagattgcagatgcatgtcgcctgaccctggacgagatggacagtgctgccagtgac
ctgctggcacaggggaccagctcactgtatagtgacgaagagtccatcctctcccgtttt
gatgaggaggacctaggagacgagatggcctgcgtccatgccctctga
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integrated database retrieval system
