Bubalus bubalis (water buffalo): 102407952
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Entry
102407952 CDS
T05912
Symbol
KDM2A
Name
(RefSeq) lysine-specific demethylase 2A isoform X1
KO
K10276
F-box and leucine-rich repeat protein 10/11 [EC:
1.14.11.27
]
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
102407952 (KDM2A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bbub03000
]
102407952 (KDM2A)
04121 Ubiquitin system [BR:
bbub04121
]
102407952 (KDM2A)
03036 Chromosome and associated proteins [BR:
bbub03036
]
102407952 (KDM2A)
Enzymes [BR:
bbub01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.27 [histone H3]-dimethyl-L-lysine36 demethylase
102407952 (KDM2A)
Transcription factors [BR:
bbub03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
102407952 (KDM2A)
Ubiquitin system [BR:
bbub04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
102407952 (KDM2A)
Chromosome and associated proteins [BR:
bbub03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
102407952 (KDM2A)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
102407952 (KDM2A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHD_4
zf-CXXC
F-box-like
JHD
F-box
JmjC
Cupin_8
LRR_4
Cupin_1
Motif
Other DBs
NCBI-GeneID:
102407952
NCBI-ProteinID:
XP_006072750
LinkDB
All DBs
Position
5:126561594..126654707
Genome browser
AA seq
1162 aa
AA seq
DB search
MEPEEERIRYSQRLRGTMRRRYEDDGISDDEIEGKRTFDLEEKLHTNKYNANFVTFMEGK
DFNVEYIQRGGLRDPLIFKNSDGLGIKMPDPDFTVNDVKMCVGSRRMVDVMDVNTQKGIE
MTMAQWTRYYETPEDEREKLYNVISLEFSHTRLENMVQRPSTVDFIDWVDNMWPRHLKES
QTESTNAILEMQYPKVQKYCLMSVRGCYTDFHVDFGGTSVWYHIHQGGKVFWLIPPTAHN
LELYENWLLSGKQGDIFLGDRVSDCQRIELKQGYTFVIPSGWIHAVYTPTDTLVFGGNFL
HSFNIPMQLKIYNIEDRTRVPNKFRYPFYYEMCWYVLERYVYCITNRSHLTKEFQKESLS
MDLELNGLESGNGDEEAVDREPRRLSSRRSVLTSPVANGVNLDYDGLGKTCRSLPSLKKT
LSGDSSSDSSRGSQNGQVWDSQCSPRKDRQVHLTHFELEGLRCLVDKLESLPLHKKCVPT
GIEDEDALIADVKVLLEELANSDPKLALTGVPIVQWPKRDKLKFPTRPKVRVPTIPITKP
HTMKPAPRLTPVRPAAASPIVSGARRRRVRCRKCKACVQGECGVCHYCRDMKKFGGPGRM
KQSCVLRQCLAPRLPHSVTCSLCGEVDQNEETQDFEKKLMECCICNEIVHPGCLQMDGEG
LLNEELPNCWECPKCYQEDSSEKAQKRKMEESDEEAVQAKVLRPLRSCDEPLTPPPHSPT
SMLQLIHDPASPRGVVTRSSPGAGPSDHHSASRDERFKRRQLLRLQATERTMVREKENNP
SGKKELSEVEKAKIRGSYLTVTLQRPTKELHGTSIVPKLQAITASSANLRHSPRVLVQHC
PARTPQRGDEEGLGGEEEDEEEEEEEDDSAEEGGAARLNGRGSWAQDGDESWMQREVWMS
VFRYLSRRELCECMRVCKTWYKWCCDKRLWTKIDLSRCKAIVPQALSGIIKRQPVSLDLS
WTNISKKQLTWLVNRLPGLKDLLLAGCSWSAVSALSTSSCPLLRTLDLRWAVGIKDPQIR
DLLTPPADKPGQDNRSKLRNMTDFRLAGLDITDATLRLIIRHMPLLSRLDLSHCSHLTDQ
SSNLLTAVGSSTRYSLTELNMAGCNKLTDQTLIYLRRIANVTLIDLRGCKQITRKACEHF
ISDLSINSLYCLSDEKLIQKIS
NT seq
3489 nt
NT seq
+upstream
nt +downstream
nt
atggaacccgaagaagaaaggattcgttacagccagagattgcgtggtaccatgcgacga
cgctatgaagatgatggcatttcagatgatgaaattgaaggaaaaagaacttttgacttg
gaagagaaactccacaccaacaaatataatgcaaattttgttacttttatggaaggaaaa
gattttaatgtagagtatatccagcggggtggcttaagagatcctctgattttcaagaat
tccgatggacttggaataaagatgccagatccagacttcactgtgaatgatgtcaaaatg
tgtgtggggagtcgtcgtatggtggatgtcatggatgtgaacacacagaaaggcattgaa
atgaccatggctcagtggacacgctactatgagaccccagaggacgagcgagaaaaactc
tataatgtcatcagcttagagtttagccacaccaggctggagaacatggtgcagaggccc
tccacggtggatttcattgactgggtagacaatatgtggccaaggcatttgaaagaaagt
cagactgaatcaacaaatgccatcttggagatgcagtatcctaaagtgcagaagtactgt
ctgatgagtgttcgaggctgctatactgacttccatgtggacttcggtggtacctctgtt
tggtatcatatccatcaagggggaaaggtcttctggctcatcccccctacagcccacaac
ctggagctgtacgagaattggctgctgtcagggaaacagggagacatctttctgggtgac
cgggtatcagattgccaacgcattgagctcaagcagggctataccttcgtcattccctca
ggctggattcatgctgtgtatactcctacagatacattggtgtttggaggcaattttttg
catagcttcaatatccccatgcagttaaagatatacaacattgaagatcgaacacgggtt
cctaataagttccgctatccattctactatgagatgtgttggtacgtgttggagcgctat
gtgtactgcataaccaaccgctctcacctaactaaggaatttcagaaagagtcccttagc
atggatttggagttaaatgggttggagtctggaaacggggacgaggaagcagtagaccga
gagccccggcgcttgagcagtagacgttctgtcctcaccagccctgtggccaatggagtc
aacctggattatgatggactgggcaaaacctgccgaagtcttccaagtctgaagaaaact
ttgtctggggactcatcctctgactctagccggggttcccagaatggccaagtgtgggat
tcccagtgtagcccccgaaaggaccgacaggtgcatctgacccactttgagcttgaaggc
cttcgttgccttgtagataaattggaatctctgccactgcacaagaaatgcgtccctaca
gggatagaagacgaagatgctctcattgctgatgtgaaggttttgctggaggaacttgcc
aacagtgatcccaagttagccctcactggagtccctatagtacagtggccgaaaagggat
aagcttaaattcccaacccggccaaaggtgcgggttcctaccatccccattacaaagcct
cacactatgaaaccagcgccgcggttaacacctgtgcgcccagccgctgcttctcccatc
gtgtctggagccagacggagacgagtgcgatgtcgaaaatgcaaagcctgcgtgcaggga
gagtgtggtgtttgtcactactgcagggacatgaagaagtttggggggcctggtcgcatg
aagcagtcctgtgttctccggcagtgcttggcacccagactgcctcactccgtcacatgt
tccctctgtggagaggtggatcaaaatgaggagacacaggactttgagaagaaactcatg
gaatgctgtatctgcaatgagattgttcatcctggctgcctccagatggatggagagggg
ttgcttaacgaggaattgccaaattgctgggagtgtccaaagtgctaccaagaggacagc
tcagaaaaagcccagaagcggaaaatggaagagagtgacgaagaagctgtgcaagccaaa
gtcctccggcccctgcggagctgtgacgagcccctcacgcccccacctcactcgcccacc
tccatgctgcagctcatccacgacccggcctccccccggggcgtggtgactcggtcatcc
cctggggccggccccagcgaccaccacagtgccagccgcgatgagcgcttcaaacggcgg
cagttgctgcggctgcaggccacagagcgcaccatggtacgggaaaaggagaacaatccc
agcggcaaaaaggagctgtctgaagttgagaaagccaagatccggggatcgtacctcact
gtcacgctgcagaggcccaccaaagagctccacgggacatccattgtgcccaagctgcag
gccatcacggcctcctctgccaaccttcgccattccccccgtgtgctggtccagcactgc
ccagcccgaaccccccagcgcggggatgaggaggggctggggggagaggaggaggacgag
gaggaggaggaggaggaagatgacagtgcagaggaggggggtgcggccaggctgaatggc
cggggcagttgggctcaggatggagacgaaagctggatgcagcgggaggtctggatgtct
gtcttccgctacctcagccgcagagaactttgtgaatgtatgcgagtgtgcaagacgtgg
tataaatggtgctgcgacaagagactttggacaaaaattgacttgagtaggtgtaaggct
attgtaccccaggctctcagtggcatcatcaagaggcagccagttagccttgacctcagt
tggaccaacatctccaaaaaacagctgacatggctcgtcaataggctgccaggactgaaa
gacctcctcctagcaggctgctcctggtctgcagtctctgccctcagcacctccagctgc
ccccttctcaggacccttgatcttcggtgggcagtaggaatcaaggaccctcaaattcgg
gacttgctgactccaccggcagataaaccaggccaggacaatcgcagcaagctccggaac
atgaccgacttccggctggcgggccttgacatcacggacgccacgcttcgtctcatcatt
cgccacatgcccctcctgtctcgactcgacctcagtcactgcagccacctgacagaccag
tcctccaatctgctcaccgctgttgggtcttccactcgttactccctcacagagctcaac
atggcaggttgcaataaactgaccgaccagaccctgatctacctacggcgcatcgccaat
gtcaccttgatcgaccttcgaggatgcaagcagatcactcggaaagcctgcgagcacttc
atctcagacttgtccatcaacagtctctactgcctgtctgacgagaagctgatacagaag
atcagctaa
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