Bubalus bubalis (water buffalo): 102410007
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Entry
102410007 CDS
T05912
Symbol
LTBP1
Name
(RefSeq) latent-transforming growth factor beta-binding protein 1 isoform X1
KO
K19559
latent transforming growth factor beta binding protein 1
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
102410007 (LTBP1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
bbub04990
]
102410007 (LTBP1)
Domain-containing proteins not elsewhere classified [BR:
bbub04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
102410007 (LTBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_CA
cEGF
TB
EGF
EGF_3
hEGF
FXa_inhibition
EGF_MSP1_1
Plasmod_Pvs28
Motif
Other DBs
NCBI-GeneID:
102410007
NCBI-ProteinID:
XP_025116646
LinkDB
All DBs
Position
12:15311020..15769959
Genome browser
AA seq
1708 aa
AA seq
DB search
MAGAWLRWGLLLWAGLLASSAHGRVRRITYVVRPGPGLAAGALPLGGPPRPRTFNVALNA
RYSRSSAGAGAPSERTRRTSPPGGAALQGLRPPQPPPEPARPGGPGGPLHPKPGGHPAAA
PFAKQGRQAMRSKVPQETQSGGGSRLQVHQKQQLQGVNVCGGQCCHGWSKAPGSQRCTKP
SCVPPCQNGGMCLRPQLCVCKPGTKGKACETTAAQDTSSPVFGGQSTAAASSWVPPEQAT
KHTSSKKADVLPRVSPVAQMTLTLKPKPSVGLSQQIHSQMTPLSSQNVMIHHGQTQEYVL
KPTYFTAQKVISGEQSTEGSLPLRFGQDHVAAPFQLSNHTGRIKVVFTPSICKVTCTKGS
CQNSCEKGNTTTLISENGHAADTLTATNFRVVICHLPCMNGGQCSSRDKCQCPPNFTGKL
CQIPVHGASLPKVYQHSQQSGKALGTHVVHSTHTLPLTMTSQQGVKVKFPPNIVNIHVKH
PPEASVQIHQVSRVDGPTGQKVKEAQPGQSQVPYQGLPVQKTQTVHSSYQQVIPHVYPVA
AKTQLGRCFQETIGSQCGKALPGLSKQEDCCGTVGTSWGFHKCQKCPKKPSYHGYNQMME
CLQGYKRVNNTFCQDINECQLQGVCPNGECLNTMGSYRCTCKMGFGPDPTFSSCVPDTPV
ISEEKGPCYRLVSSGRQCMHPLSVHLTKQLCCCSVGKAWGPHCEKCPLPGTAAFKEICPG
GMGYTVSGVHRRRPIHHHVGKGAVFVKPKNTQPVAKSTHPPPLPAKEEPVEALTFSREQG
PGAVEPEVATVPPEKEIPSLDQEKTRLEPGQPQLSPGISTIHLHPQFPVVIEKTSPPMPV
EVAPEASTSSASQVIAPTQVTEINECTVNPDICGAGHCINLPVRYTCICYDGYKFNEQQR
KCVDIDECAQDQHLCSQGRCENTEGSFLCICPAGFMASEEGTNCIDVDECLRPDVCGEGH
CVNTVGAFRCEYCDSGYHMTPGGHCEDIDECLTPSTCPDEQCVNSPGSYQCVPCTEGFRG
WNGQCLDVDECLEPKICTNGTCSNLEGSYMCSCHKGYSPTPDHKHCEDIDECQQGTMCMN
GQCKNTDGSFRCTCGQGYQLSAAKDQCEDIDECQHHHLCSNGQCRNTEGSFRCVCDHGYR
ASALGDHCEDINECLEDKSVCQGGDCINTKGSYECTCPDGFQLNDNKGCQDINECEQPGL
CGPHGECLNTDSSFHCICEQGFSISADGRTCEDIDECVNNTICDSHGFCDNTAGSFRCLC
YQGFQAPQDGQGCVDVNECELLSGVCGEAFCENVEGSFLCVCADESQEYSPMTGQCRSRL
SMDSEVDQPGEERKECYYNLNDASLCDNVLAPNVTKQECCCTSGAGWGDNCEVFPCPVPG
AAEFTEMCPRGKGFVPSEESSYGVDGENYKDADECLLFGQEICKNGFCMNTQPGYECYCK
QGTYYDPVKLQCFDIDECQDPNSCIDGQCINTEGSYNCFCTHPMVLDASEKRCIRPTESH
EQIEETDVYQDLCWEHLSDEYVCSRPLVGKQTTYTECCCLYGEAWGMQCALCPMKDSDDY
AQLCNIPVTGRRRPYGRDALVDFSEQYAPEADPYFVQDRFLNSFEELQAEECGILNGCEN
GRCVRVQEGYTCDCFDGYHLDMAKMTCVDVNECDELNNRMSLCKNAKCINTEGSYKCVCL
PGFVPSDKPNYCTPLNTALNLEKDSDLE
NT seq
5127 nt
NT seq
+upstream
nt +downstream
nt
atggcgggggcctggctcaggtgggggctcctgctgtgggcagggctgctggcctcatcg
gcgcacggccgggtgcggaggatcacgtacgtggtgcgcccgggccccggcctggcggcg
ggcgccttgcccctgggcgggcccccgcgcccgcggaccttcaacgtcgcgctcaacgcc
aggtacagccgcagctcggccggcgcaggggccccctcggagcggactcggcgcaccagc
ccgcccggcggcgcggccctgcaggggctccggccgccacagccaccgccggagccggcg
cgtcccgggggccccggcgggccgctccaccccaagcccggcggtcacccggcggccgcc
ccgttcgccaaacagggcaggcaagcgatgcgctccaaggtgccgcaggagacccagagc
ggcgggggctcgaggctgcaggttcaccagaagcagcagctgcagggggtcaatgtctgt
ggtgggcagtgttgtcatggctggagtaaggcccctggctcccagaggtgcaccaaacca
agctgtgttccgccgtgtcagaatggagggatgtgtctccgacctcagctctgtgtgtgt
aaaccaggaaccaagggcaaagcctgtgagacaacagctgcccaggacacctcgtcccca
gtctttggagggcagagtactgcggctgcttcctcctgggtccctcctgagcaagccaca
aagcacacttcatctaagaaggcagacgttctaccaagagtcagtcctgtggcccagatg
accttgaccctcaagccgaagccttcagtgggactctcccagcagatccattctcagatg
acacccctatcttcacagaatgtgatgatacatcatggtcagacccaggaatacgtgctc
aagcccacatacttcacagcccagaaggtgatttctggagaacagtccactgaaggttcg
ctccctttaagattcgggcaggatcacgtggcagcaccttttcagttgagtaaccacact
ggccgcatcaaggtggtctttactccgagcatctgtaaagtgacctgcaccaagggcagc
tgtcagaacagctgtgagaaggggaacaccaccactctcattagtgagaatggtcacgct
gccgacaccctgacagccacgaacttccgagtggtaatttgccatcttccatgtatgaat
ggaggccagtgcagttcgagggacaaatgccagtgccctccaaatttcacagggaagctc
tgtcagatcccagtccacggggccagcctgcctaaagtgtatcagcattcccagcagtca
ggcaaggcgttgggaacacatgtcgtccactcgacacatactttgcctctgaccatgacc
agccagcaaggagtaaaagtgaaatttcctcctaacatagtcaatatccatgtgaagcac
cctcccgaggcctcggtccagatacatcaggtttcaagagttgatggcccaacaggtcag
aaggttaaagaagctcaaccaggccagtcccaagtcccttaccaaggccttcctgtccag
aagacccagacggtccattcctcataccagcaagtcattcctcacgtgtatccggtggct
gctaaaacccagctgggccggtgcttccaggaaaccattgggtcacagtgtggcaaagct
ctccctggcctttcaaagcaggaggactgctgtggaactgtgggcacctcctggggcttt
cacaaatgccagaaatgccccaagaagccatcttatcatggatataatcaaatgatggaa
tgtctacaaggttataaacgggttaacaacaccttttgtcaagatattaatgaatgccaa
ctacagggtgtgtgccctaatggtgagtgtttgaataccatgggcagctacagatgtacc
tgcaaaatgggatttgggccggatcctaccttttcaagttgtgttccggacacccctgtg
atctcggaagagaaagggccatgttaccgactggtcagttccggaaggcagtgtatgcac
cctctgtctgtccacctcaccaagcagctctgctgttgtagtgtgggcaaggcctggggc
ccacactgtgagaaatgcccccttccaggcacagctgcttttaaggaaatctgtcctggt
ggaatgggttatacggtttctggcgttcatagacgcaggccaatccatcaccatgtaggt
aaaggagctgtatttgtcaagccaaagaacactcaacctgttgctaaaagtactcatcct
ccacctctcccagccaaggaagaaccagtggaggccctgaccttctcccgggaacagggg
ccaggagcggtggagccagaagtggcaactgtacctcctgagaaggaaataccttcattg
gatcaagagaaaaccagacttgagcctggtcaaccccagctttctccaggcatttcaacc
attcatctgcatccacagtttccagtagtgattgaaaaaacatcacctcctatgcctgtg
gaagtagctcctgaagcttcaacatcaagcgccagccaagtcattgcacctactcaagta
acagaaatcaatgagtgcactgtgaaccctgacatctgtggagcaggacactgcattaac
ctgcccgtgaggtatacctgtatatgctacgatggctacaagttcaatgagcaacagagg
aaatgtgttgatattgatgaatgcgctcaggatcaacacctttgctcccagggacgctgt
gaaaacactgagggaagcttcttgtgtatttgcccagcaggattcatggccagtgaggag
ggtactaactgcatagatgtcgatgagtgtctgaggccagacgtctgtggggaagggcac
tgtgtcaataccgtgggggccttccgatgtgaatactgcgatagcgggtaccacatgacc
ccaggaggccactgcgaggatattgatgaatgtttgactccaagtacttgtccagatgag
cagtgtgtgaattctcccggatcttaccagtgtgttccctgcacagaagggtttcgaggc
tggaacgggcagtgtcttgatgtggatgaatgcctggaaccaaagatctgcacaaatggt
acttgctccaaccttgaaggatcctacatgtgttcatgccacaagggctacagcccaact
ccagaccacaagcactgtgaagatattgacgaatgccagcaagggactatgtgcatgaat
gggcagtgcaaaaacacggacggctccttcaggtgtacctgtgggcagggctaccagcta
tcagcagcaaaagaccaatgtgaagatattgatgagtgccagcaccaccatctctgcagt
aacgggcagtgcaggaacacggagggctccttccgctgcgtttgtgaccacggttacaga
gcatccgcccttggagaccactgtgaagatatcaatgaatgcttggaggacaagagtgtt
tgccagggaggagactgcattaatactaaagggtcctatgaatgtacttgtccagatgga
ttccagctaaatgacaataaaggatgtcaagatattaatgaatgtgaacaacctggactc
tgtggtcctcatggagaatgtctgaacacagacagttcttttcactgcatctgcgaacag
ggtttctcaatctctgcagatggacgcacgtgtgaagatattgatgaatgtgtaaacaac
actatttgtgacagtcacgggttttgtgacaatacggctggctccttccgctgcctctgt
tatcagggctttcaggccccacaggatgggcaagggtgtgtggatgtgaacgaatgtgag
ctgctcagtggcgtgtgtggtgaagccttctgtgaaaatgtagaagggtccttcctgtgt
gtgtgcgctgacgaaagccaggagtacagccccatgactgggcagtgccgctcccggctc
tccatggactcagaagtagatcaacccggagaagaaaggaaagaatgctactataacctg
aacgacgccagtctgtgtgacaacgtgctggcccccaatgtcaccaagcaggagtgctgc
tgcacctccggcgccggctggggagacaactgtgaggtcttcccctgcccggtcccgggc
gctgctgaattcactgaaatgtgtcctagagggaaaggttttgtcccctcggaagaatcc
tcttatggcgttgatggtgaaaactataaagatgcagatgaatgcctactttttggacaa
gagatctgcaaaaatggcttctgtatgaacactcagcctggttacgaatgctactgtaag
caagggacgtactacgatcctgtcaaattgcagtgctttgatatagacgagtgtcaagac
cccaacagttgcattgatggccagtgcattaatacagaaggctcttataactgcttctgt
acccacccaatggtcctggatgcttcggaaaaaagatgtatccgaccaactgaatcacat
gaacaaattgaagaaaccgatgtctaccaggatctgtgctgggaacatctgagtgacgag
tacgtgtgtagccggcctcttgtcggcaagcagacgacgtacacggagtgctgctgtttg
tacggagaggcctggggcatgcagtgcgcgctctgtcccatgaaggattcagacgactat
gcccagctgtgtaacatccccgtcacgggacgccggcggccatatggacgggacgccttg
gttgacttcagtgaacagtatgctcctgaagctgatccctactttgttcaagaccgtttt
ttaaacagctttgaggagttgcaggcggaagaatgtggcatcctcaatggatgtgaaaac
ggccgctgtgtcagggtgcaggaaggctacacctgcgactgctttgatgggtatcacctg
gatatggccaagatgacctgtgtcgatgtcaacgaatgtgatgagttgaacaaccggatg
tctctctgcaagaatgccaagtgcatcaacaccgaagggtcctataagtgtgtgtgtctg
ccgggctttgtaccttctgacaagccaaactactgcactccattgaatactgccttgaat
ttagaaaaagacagtgacctggagtaa
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