Bubalus bubalis (water buffalo): 102412671
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Entry
102412671 CDS
T05912
Symbol
TRPC6
Name
(RefSeq) short transient receptor potential channel 6 isoform X6
KO
K04969
transient receptor potential cation channel subfamily C member 6
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub04022
cGMP-PKG signaling pathway
bbub04360
Axon guidance
bbub04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09130 Environmental Information Processing
09132 Signal transduction
04022 cGMP-PKG signaling pathway
102412671 (TRPC6)
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
102412671 (TRPC6)
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
102412671 (TRPC6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
bbub04040
]
102412671 (TRPC6)
Ion channels [BR:
bbub04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
102412671 (TRPC6)
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GFIT
Motif
Pfam:
TRP_2
Ion_trans
PKD_channel
Ank_2
Ank
Ank_4
Ank_5
Motif
Other DBs
NCBI-GeneID:
102412671
NCBI-ProteinID:
XP_044785732
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Position
16:complement(78069735..78228041)
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AA seq
815 aa
AA seq
DB search
MNQSPAAFGPRRGGSPAVAAGAGARRNESQDYLLMDSELGDDAQPPLPAYGYYPCLRGTD
NRLTHRRQTVLREKGRRLANRGPAYMFNDHSTSLSIEEERFLDAAEYGNIPVVRKMLEEC
LSLNVNCVDYMGQNALQLAVANEHLEITELLLKKENLSRVGDALLLAISKGYVRIVEAIL
SHPAFAEGKRLATSPSQSELQQDDFYAYDEDGTRFSHDVTPIILAAHCQEYEIVHTLLRK
GARIERPHDYFCKCSECNQKQKHDSFSHSRSRINAYKGLASPAYLSLSSEDPVMTALELS
NELAVLANIEKEFKMGKIMRGPFMKFVAHAASFTIFLGLLVMNAADRFEGTKILPNETST
DHAKQLFRMKTSCFSWMEMLIISWVIGMIWAECKEIWTQGPKEYLFELWNMLDFGMLAIF
AASFIARFMAFWHASKAQSIIDANDTLKDLTKVTLGDNVKYYNLARIKWDPSDPQIISEG
LYAIAVVLSFSRIAYILPANESFGPLQISLGRTVKDIFKFMVIFIMVFVAFMIGMFNLYS
YYIGAKQNEAFTTVEESFKTLFWAIFGLSEVKSVVINYNHKFIENIGYVLYGVYNVTMVI
VLLNMLIAMINSSFQEIEDDADVEWKFARAKLWFSYFEEGRTLPVPFNLVPSPKSLFYLL
LRLKKWISELFQGHKKGFQEDAEMNKKRNEGKKFGILGSHEDLSKLSLDRKQFAHSKQSS
IRSSEDFQLNSFTNPPRQYQKIMKRLIKRYVLQAQIDKESDEVNEGELKEIKQDISSLRY
ELLEEKTQNSEDLAELIRKLGEKLSMEPNQEESNR
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
atgaaccagagcccggccgcgttcgggccccggaggggcggctctcccgctgtggcggcc
ggggctggcgcacggcgcaacgagagccaagactacctgctcatggactcggagctggga
gacgacgcgcagcccccgctgcctgcctacggctactacccctgcctccggggcaccgac
aatagactgacccatcggcggcagacagttctccgtgagaaggggagacggttagctaac
cgaggaccagcgtacatgtttaacgaccactcaacaagcctatctattgaggaggaacgc
tttttagatgcagctgagtatggcaacatcccagtggtaaggaagatgttggaagaatgc
ctctcactcaatgtcaactgtgtggattacatgggccagaacgccctgcagctggcagtg
gctaatgagcatctggaaattacagaacttcttctcaagaaagaaaatctctcacgcgtt
ggggatgccttgcttttagctattagtaaaggttatgttcggattgtggaagccattctc
agtcacccagcttttgctgaaggcaagcggttagcaacaagccccagtcagtctgaactc
cagcaagatgatttttatgcatatgatgaagacgggacacggttctcccatgacgtgacc
cccatcattctggctgcccactgccaggaatatgaaatagtgcacaccctcttgcggaag
ggtgctcggatcgaacggcctcatgactatttctgcaagtgcagtgaatgcaaccagaaa
cagaagcatgactccttcagccactccagatctagaattaatgcctacaaaggcctggcg
agcccagcttacctgtcattgtctagcgaagacccagtcatgacagctttagagcttagc
aatgagctggcagtgctggccaacatagagaaggagttcaagatggggaagataatgcgt
ggaccattcatgaagtttgtggcacacgctgcctccttcaccatttttctgggactgcta
gtcatgaatgcagctgacagattcgaaggcaccaaaatccttcctaatgaaaccagcaca
gatcatgcaaaacagctgttcaggatgaaaacatcctgcttctcatggatggagatgctc
attatttcctgggtaataggcatgatatgggctgaatgtaaagaaatttggactcaaggc
cccaaggagtacttgtttgagttgtggaatatgcttgattttggaatgctggcaatcttt
gcagcatcattcattgcaagattcatggcattttggcatgcttccaaagcccagagcatc
attgatgcaaatgatactttaaaggatttaacaaaagttacactgggagacaatgtgaaa
tactacaatttggccaggataaagtgggacccctctgatcctcaaattatatctgaaggt
ctttatgcaattgctgtagttttaagtttctccagaatagcctacattttaccagcaaat
gaaagctttggacctctgcagatatcacttggaagaacagtaaaagatatcttcaagttc
atggtcatattcatcatggtgtttgtggcctttatgattggaatgttcaacctctattcc
tactacattggtgcaaagcaaaacgaagccttcacaacagtggaagagagttttaagaca
ctgttttgggctatatttggactttctgaagtgaaatcagtggtcatcaactataatcac
aaatttattgaaaacatcggttatgttctttatggagtctataatgttacaatggtcatt
gttttgctaaacatgttaattgcaatgatcaacagttcattccaggaaattgaggatgat
gctgatgtggaatggaaattcgcaagggccaaactttggttttcttactttgaggaggga
agaactcttcctgttcccttcaacctggtgccaagtccaaagtccctgttttatctctta
ttgaggcttaaaaagtggatttctgaattgttccagggccataaaaaaggtttccaggag
gatgcagaaatgaacaagaagagaaatgaaggaaagaaatttggaattttgggaagtcat
gaagacctttcaaagttatcacttgacagaaaacagtttgcacatagtaaacaatcaagt
ataaggagctcagaagatttccagttaaacagtttcactaatcctccaagacaatatcag
aaaataatgaagaggctcattaaaagatatgtattacaagcccagatagacaaggaaagt
gatgaagtgaatgaaggggaactgaaggaaattaaacaagacatctcaagtctccgctat
gaactccttgaagaaaaaactcagaattcagaagacctggcagaacttattagaaaactt
ggggagaaattatcaatggagccaaatcaagaggaaagcaatagataa
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