Bubalus bubalis (water buffalo): 102413198 Help Entry 102413198         CDS       T05912                                  Symbol TRAF5 Name (RefSeq) TNF receptor-associated factor 5   KO K09849   TNF receptor-associated factor 5 Organism bbub  Bubalus bubalis (water buffalo) Pathway bbub04064   NF-kappa B signaling pathway bbub04217   Necroptosis bbub04621   NOD-like receptor signaling pathway bbub04657   IL-17 signaling pathway bbub04668   TNF signaling pathway bbub05163   Human cytomegalovirus infection bbub05168   Herpes simplex virus 1 infection bbub05169   Epstein-Barr virus infection bbub05170   Human immunodeficiency virus 1 infection bbub05200   Pathways in cancer bbub05203   Viral carcinogenesis bbub05222   Small cell lung cancer Brite KEGG Orthology (KO) [BR:bbub00001]  09130 Environmental Information Processing   09132 Signal transduction    04064 NF-kappa B signaling pathway     102413198 (TRAF5)    04668 TNF signaling pathway     102413198 (TRAF5)  09140 Cellular Processes   09143 Cell growth and death    04217 Necroptosis     102413198 (TRAF5)  09150 Organismal Systems   09151 Immune system    04621 NOD-like receptor signaling pathway     102413198 (TRAF5)    04657 IL-17 signaling pathway     102413198 (TRAF5)  09160 Human Diseases   09161 Cancer: overview    05200 Pathways in cancer     102413198 (TRAF5)    05203 Viral carcinogenesis     102413198 (TRAF5)   09162 Cancer: specific types    05222 Small cell lung cancer     102413198 (TRAF5)   09172 Infectious disease: viral    05170 Human immunodeficiency virus 1 infection     102413198 (TRAF5)    05168 Herpes simplex virus 1 infection     102413198 (TRAF5)    05163 Human cytomegalovirus infection     102413198 (TRAF5)    05169 Epstein-Barr virus infection     102413198 (TRAF5)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04121 Ubiquitin system [BR:bbub04121]     102413198 (TRAF5) Ubiquitin system [BR:bbub04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    TRAF proteins     102413198 (TRAF5) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TRAF-mep_MATH MATH_2 zf-TRAF zf-C3HC4_2 TRAF3_RING zf-TRAF_2 zf-C3HC4 zf-C3HC4_4 DUF4941 zf-RING_6 zf-RING_UBOX Sina_ZnF TRAFD1-XIAF1_ZnF DUF4279 DUF5753 Mt_ATP_synt Spc29 Motif Other DBs NCBI-GeneID:  102413198 NCBI-ProteinID:  XP_006069728 LinkDB All DBs Position 5:8895195..8940466 Genome browser AA seq 558 aa AA seqDB search MAYFEEQGGVPCGFTRQNSGNSISLDFEPDAEYQFVERLEERYKCAFCHSVLHNPHQTGC GHRFCHQCILSLRELDAVPLCPVDKEVIKSQEVFKDNCCKREVLNLYVFCKNAPRCNAKI ILGRYQDHLQHCLFQPVQCSNENCREPVLRKDLKEHLSAYCQFREEKCLYCKKDVVVINL QNHEENLCPDYPVSCPNKCLQTIPRTEVDEHLAVCPEAEQDCPFKNYGCAVKDKRGNLQE HERSALRDHMLLVLEKNFQLEEQISDLYKSLEQKESKIQQLAEMVKKFEKEFKQFAQLFG KNGSFLSNMQVLASHIDKSAWLEVQVRQLLQMANQQQSKFDLKPLVEAIDTVKQKITLLE TNDQRLVVLEGETNKHDAHINIHKAQLNKNEERFKLLESACYNGKLIWKVTDYKLKKKEA LDGHTVSIFSQPFYTSRCGYRLCARAYLNGDGSGKGTHLSLYFVVMRGEFDSLLQWPFRQ RVTLMLLDQSGKKNHIMETFKADPNSSSFKRPDGEMNIASGCPRFVAHSTLENAKNTYIK DDTLFLKVAVDLTDLEDL NT seq 1677 nt NT seq  +upstreamnt  +downstreamnt atggcctattttgaggagcaaggaggagtgccctgtggtttcacccgccagaattctggc aactccatttccttggacttcgagcccgacgcggagtaccagtttgtggagcggttggaa gagcgctacaagtgtgccttctgccactcagtgcttcacaacccccaccagacgggctgt gggcaccgcttctgccaccaatgcatcctgtccctgagagaactggacgcagtcccactc tgccctgtagataaggaggtgatcaagtctcaggaggtgtttaaagacaattgctgcaaa agggaagtcctcaatttgtatgtgttttgcaaaaatgctcccagatgtaatgccaagatt attctgggacgataccaggaccaccttcagcactgcctgttccagcctgtgcagtgctct aatgaaaactgtcgggagccagtccttcgcaaagatctgaaagagcatctgagcgcatac tgccagtttcgagaggaaaaatgcctttattgcaaaaaggatgtggtagtcatcaatcta cagaatcacgaggagaacttgtgtcctgactacccagtatcttgtcccaacaagtgtttg cagaccattccaagaactgaggtggatgaacacctggccgtgtgtcctgaagctgaacaa gactgtccttttaagaactatggctgtgctgtaaaggataaacgggggaacctgcaggaa catgagcgttcggccttacgggaccacatgcttctggttttagaaaagaacttccaatta gaggagcagatttctgacttatataagagcctagaacaaaaagaaagcaaaatccagcag ctagcagaaatggtaaagaaattcgaaaaggagttcaagcaatttgcgcagttgtttggc aaaaatggaagcttcctttcaaatatgcaggttcttgccagtcacattgacaagtccgct tggctagaagttcaggtgcgtcagttattacaaatggctaaccagcaacagagtaaattt gatctgaagcctttggtggaagcaattgatacagtgaaacagaaaatcaccctgttggaa accaatgaccaaagactagttgttttggaaggggagactaacaaacatgatgcccacatt aatattcataaagcacagctgaataaaaacgaagagcgatttaaactgctagaaagcgcc tgctataacggaaagctcatctggaaggtgacagactacaagctgaagaagaaggaggcg ctggacggacacacagtatccatcttcagccaacccttctacaccagccggtgtggctac cgcctctgcgctagagcctacctgaacggggacgggtctgggaaggggacgcacctgtct ttatactttgtggtgatgcgaggggagtttgactcactgttgcagtggccgttcaggcag agggtaactctgatgcttctggaccagagtggcaaaaagaaccacattatggagaccttc aaggcggaccccaacagcagcagctttaagagacccgacggggagatgaacatcgcctcc ggctgtcctcgctttgtggctcattccactctggagaatgccaagaacacctacattaag gatgataccctcttcttgaaagtggctgtggacttaactgacctggaggatctctaa

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