KEGG   Bufo bufo (common toad): 120978714
Entry
120978714         CDS       T07950                                 
Symbol
APAF1
Name
(RefSeq) apoptotic protease-activating factor 1
  KO
K02084  apoptotic protease-activating factor
Organism
bbuf  Bufo bufo (common toad)
Pathway
bbuf04115  p53 signaling pathway
bbuf04210  Apoptosis
bbuf05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:bbuf00001]
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    120978714 (APAF1)
   04115 p53 signaling pathway
    120978714 (APAF1)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    120978714 (APAF1)
SSDB
Motif
Pfam: WD40 WD40_Prp19 Beta-prop_EML_2 WD40_WDHD1_1st WD40_CDC20-Fz NB-ARC EIF3I WDR55 Beta-prop_TEP1_2nd APAF1_C Beta-prop_CAF1B_HIR1 APAF-1-like_WHD WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_EML ANAPC4_WD40 NBCH_WD40 WD40_MABP1-WDR62_1st Beta-prop_IFT122_1st WDR90_beta-prop_4th CARD Beta-prop_WDR75_1st Beta-prop_RIG_2nd WD40_like Beta-prop_Vps41 Beta-prop_TEP1_C Beta-prop_NWD2_C Beta-prop_WDR35_TULP_N Beta-prop_IFT140_1st Beta-prop_HPS5 Beta-prop_WDR19_1st eIF2A Beta-prop_SCAP Beta-prop_NUP159_NUP214 WD40_RFWD3 Beta-prop_DCAF4 CARD_2 Beta-prop_DCAF12 Beta-prop_VPS8 AAA_16 Ge1_WD40 Beta-prop_SPT8 AAA_22 Beta-prop_Nup120_160 Beta-prop_IFT140_2nd ATPase_2 NACHT B3R
Other DBs
NCBI-GeneID: 120978714
NCBI-ProteinID: XP_040262946
LinkDB
Position
1:complement(437980005..438078597)
AA seq 1244 aa
MDEESKSLLLQNLVALAKDIRSSYIMDHMISDGVITPHEEEMVKNKATQLDRANQLIKII
LGKDNRAFNSFYNALLHEGYKDLAALLKGATSLDLFRSGKASSNGITSYVKTALCEGGVP
QRPVVFVSREKMIKGIQDSLYHLKNESGWVIVYGMAGCGKSVLAAEALRDHSILKDCFPG
GVHWLSVGKQDKAGLLMKLQNLCTRLDQDCKYSQRPPLNVEEAKDRLRRLIMHSYPRCLL
ILDDVWDSWVLKAFDIQCRVLITSRDRSVIDTVSGMKLFVHVDSELEHQKGLEILSLYVD
TKVEKLPEEAHDIIQQSKGSPLVVSLIGALLREFPSRWAFYLKQLQRKQFKRIRKSSSYD
YEALDEAMSMSVDRLKDDVKEYYNDFSVIEKDVKVPTKVLCILWDMESEDVEDMLQEFVN
KSLLYCDRNGKSFLYYLHDLQLDFLTERNRAQLPALHAKLVSQYRKRYLHGLPTVDQEDY
AYWYHYLAYHMAQANMHQELCSLLFSFDWLKSKTRLFGPAHLIHEFVIYRDILDKQDSKA
REDFQEFLSVNGHLLGQNSHINMVQLGLSQPNESAVYKHAIQHVKEELQQGALYVNWINK
QSMKNLASLAVRPHTEAVYHACFSRDGQRIASCGADRTLQIFKSGTGENLLHIEAHEDEV
LCCAFSPDDRYVATCSADKKVKIWNAVTGTLIQNYDEHSEVVSCCQFTNGGSPTLLATCS
HDCLLKLWDLSKKHCKNTLFGHGDYVNHCRFSPDDKYLASCSMDGTLKLWDVSSANEFKT
IDVAVSFQENDESQFLLKCCSWSNDCSRIMVTARNRLYIFDVESSDLVSEIEACEQSTIL
YCDFCTTNQIVAMALSHYVVQLWDIDSSTKIADFNAHLSWVHCVKFFPEGSSFLTSSDDQ
TVKLWETNKVCKPSGTILKSEFDVVFSGDEVTVLAPDKEDRLLLINGKTGDLVCQSSRQD
FLLTCCCLRHDQQLAAVGGEDGSVQVFDLVTGKFLKHSQGHSGTVQHCQFTLDGEWLVSS
SDDSTIQVWNWSSGNSFLLQGHNEAVRCFKILENAKLLSWSFDGTVMVWDLQNGRKEDVL
QCHNGAVLSCDVSSDSLKFSTTSADKSAKIWSFAGLSLLHELRGHQSCVRCCNFSSDNHY
LATGDDDGEIMIWSVLSGELLRQCLEMSVNKIDGWVTDIHFSPDSKLLVTSGAHVKWWDV
DTGTCKQTFYTNGTNLKSIHPCSSFRTFVTIDNLGILYVLQLVE
NT seq 3735 nt   +upstreamnt  +downstreamnt
atggacgaagaatccaaaagcttacttcttcagaatctagtagcgctagcgaaggatatc
cgctcctcctacatcatggaccatatgataagtgatggggtcattacaccacatgaggag
gaaatggttaaaaataaggctactcagcttgaccgagcaaaccagctcatcaagatcatt
ctcggcaaagacaaccgtgcttttaattccttttacaatgctctgctacatgagggttac
aaagacttggctgctcttctcaaaggggcgacttcccttgatttgttcagaagtggcaaa
gcttcatcgaacggtatcacatcatatgtgaaaacagccttatgtgaaggtggagtgcca
cagagaccagttgtgtttgtctctcgggagaagatgataaagggcatccaggacagcttg
taccatttgaagaatgagtctggctgggtgatagtgtatggcatggcaggctgtggcaag
tcagtattagccgctgaagctctccgggaccacagcattcttaaagactgtttccctggg
ggagtccactggctttctgttgggaaacaggacaaagcaggtttgctgatgaagctgcag
aatctgtgcacccgtctggatcaggactgcaaatattcccagagacctcctctgaatgtt
gaggaagccaaagaccgacttcgccgcctcataatgcattcatatcccaggtgtctccta
attttggatgacgtttgggattcctgggtgttgaaggcatttgacatccagtgccgtgtt
ctcataacaagtagagacagaagtgtgattgacaccgtgtccgggatgaagctatttgtc
catgtggacagtgaactagaacaccagaagggcttagaaattctctctctttatgtggac
acgaaagtagaaaagctgccagaagaggcgcatgatatcatacaacagtcaaaaggctcg
cctctcgtagtgtcattaattggcgcactgttacgagaattccccagccgctgggctttc
tacctcaaacagctacagaggaaacagttcaaaagaataagaaaatcctcatcgtacgat
tatgaagcactggatgaagccatgtctatgagtgtggataggctaaaagacgatgtaaag
gaatactacaacgatttctccgttatagaaaaggatgtgaaagtgccaactaaggttctg
tgtatcctatgggacatggagagcgaggacgtggaggacatgcttcaggagtttgtcaac
aagtcactgttgtactgtgatcgcaatggaaagtcatttctgtattatttgcatgatctc
caactggattttctgaccgagcgaaaccgtgcacaactgcctgctcttcacgccaagctt
gtcagtcagtatcgcaagcgctacttacacgggctacctaccgtggaccaagaggattat
gcatactggtaccattatctagcgtaccatatggcacaggccaacatgcaccaagaactt
tgctccctgctgttttcatttgattggttaaaatcgaagacgagattatttgggcctgct
cacctcattcatgagtttgtgatttaccgggacattctcgataaacaggacagtaaagca
cgtgaagattttcaagagtttttgtctgtaaacggtcatctcctggggcagaattctcat
ataaacatggtccagttggggctttctcagccaaatgagtctgcagtgtataaacatgct
attcaacatgtcaaagaagaacttcagcaaggagcactctatgtcaactggataaacaag
caaagtatgaagaacctggcaagcctagcagtgcgtcctcacacagaggcagtgtaccat
gcctgcttttctcgggatggacagaggatcgcctcctgtggagctgatagaaccttacag
atctttaaaagtggaactggggaaaatctgcttcatatagaagctcatgaggatgaagtt
ctgtgctgtgccttctcacccgatgacagatatgtagcaacttgttcagccgataaaaaa
gtgaagatatggaacgcggtgacggggaccctgatacagaattatgatgaacattcggag
gtggtcagctgctgccagttcaccaatggaggctctcctactctccttgccacatgttct
catgactgcttgctcaaactgtgggaccttagtaagaagcattgtaagaacacccttttt
ggccacggagactatgtcaaccattgcaggttttcaccagatgacaagtatttggcaagc
tgttctatggatggcacattaaagctctgggatgtatcatctgctaatgagttcaagacc
attgatgttgcagtgtctttccaagaaaatgatgaatctcagtttctgctgaaatgctgt
tcttggtctaatgactgctccagaattatggtgaccgcacgtaatcgcctttatattttt
gatgtagaaagcagtgatcttgtgtctgagattgaagcgtgtgaacagagcactatactg
tattgtgacttctgcacaacaaatcagattgtagcaatggcactgtcacattatgttgtc
cagctgtgggatatagactccagtacaaaaatagccgacttcaatgcacatttaagttgg
gtccactgtgtcaaattttttccagaagggtcttcgttcttgacgtcttcagatgaccag
acagtgaagctttgggaaacaaataaagtgtgcaagccctcaggcacaatcctgaagagt
gaatttgatgtggtgtttagtggagatgaagtgactgttttggcccctgacaaggaagat
cggttactgttaattaatggaaagactggagatctggtttgccagagcagcagacaggac
tttttattaacatgctgctgcctgcgccatgatcaacaattagcagctgttggtggagaa
gatggaagtgtccaggtttttgatttggtcactggcaagtttttgaagcactcacagggt
cacagcggaacggtccagcattgccagttcaccctcgatggggagtggctggtatcaagc
tctgatgactcaacaatccaggtctggaactggtcatctggaaatagctttttactacaa
ggacacaacgaagctgtgaggtgcttcaaaattcttgagaatgccaagctcctgtcctgg
tcatttgatgggactgtgatggtatgggaccttcagaatggacgaaaagaagatgtactt
cagtgtcacaatggtgctgtcctgtcttgtgatgtttcatctgactcactgaaattttca
actacttcagctgataagagtgccaagatctggagttttgctggattatctcttctacat
gagctgagaggtcatcagagctgtgtgcgatgctgcaacttttcatctgacaaccactat
ttagcaaccggcgatgacgatggtgaaataatgatttggagtgtgctaagtggagaactt
ctcagacaatgccttgagatgtctgtgaataagattgatggctgggtgacagatattcac
ttttcacccgacagtaaactattagtaacctccggagcccatgtcaaatggtgggacgtg
gacactgggacctgcaaacagactttctacactaatggcacaaacttgaagtcaatacat
ccgtgttcttcttttagaacttttgtaaccattgacaatcttggaattctgtacgtgctt
cagttggtggagtga

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