Bufo bufo (common toad): 120986415
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Entry
120986415 CDS
T07950
Symbol
LDLR
Name
(RefSeq) low-density lipoprotein receptor
KO
K12473
low-density lipoprotein receptor
Organism
bbuf
Bufo bufo (common toad)
Pathway
bbuf03272
Virion - Hepatitis viruses
bbuf04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
bbuf00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
120986415 (LDLR)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
120986415 (LDLR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bbuf04131
]
120986415 (LDLR)
Membrane trafficking [BR:
bbuf04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
120986415 (LDLR)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
EGF_CA
SGL
TMEM154
EGF
EGF_3
Motif
Other DBs
NCBI-GeneID:
120986415
NCBI-ProteinID:
XP_040270905
LinkDB
All DBs
Position
1:790277719..790297221
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AA seq
886 aa
AA seq
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MGPSRISEISLLLLLIHLTSAIPATTKCDRNEFQCDDGKCIPYKWVCDGSEECRDGSDEF
PETCRHKTCSPDQFSCGDRSNRCIPKSWQCDDQEDCENGSDEKDCARKPCASDDQFQCRS
GMCISLEYQCDGDHDCDDGSDEDTCPPPTCNPAFFQCKNSTLCIPKLWTCDGDPDCEDGS
DEESCEGKEPIKTDKPCSSLEFHCGSGECVHMSWKCDGQFDCKDKSDEKDCEKPTCSPDQ
FQCNNGKCIHGSRQCDRQYDCEDLSDEMGCVNATRCEGPDKFKCSSGECISMDQVCNVAK
DCRDWSDEPLKECALNECLEKNGGCSHICNDLKIGYECLCPEGYRLVNGRKCKDIDECLR
PDTCGQICTNLEGSYKCECYDGYQIDPKTGSCKSTGTVAYLFFTNRHEVRKMTLDRSEYT
SFIPSLKNVVALDMEIASNKIYWSDLSQKKIYSALMDKAHNFSHHETVISNEIVSPDGIA
VDWVHANLYWTDSYIGTISVANTAGSKRKTLFSQGLAKPRDIVVDPTKGFMYWTDWGAPA
KIEKGGLNGVDRQTLVDSDIEWPNGITLDLTHQRLYWVDSKLHTLSSIDVTGDNRRKVIV
DEHSLSHPFGLTIFEDLVFWTDIDNEAIFSANRLTGEQITKVAEDLLSPEDIVLYHNRGQ
PKAENWCQSENGGCEYLCLPAPQITAGSPKFTCVCPDGEHLGTDGKSCVKGPTSTAAFVS
LTPVTTTATPKSTTLAKLITSAPRRPSTAKPHQPTTRPSTTVTTTTSQPSTTQSTKRNLD
LSTAGITSSTESHQGVNNGDVKMETSESHSHSSVLYAVIPVVILCLLSFGGFLLWRKWRL
KNTNTIHFENPVYQKTTEEDEIHICRSQDGYTYPSRQMLSSEDDIA
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atgggaccttccaggatctccgagatctccttactgctgctgctgatccatctgacatct
gcaatcccagcgaccactaagtgtgacagaaacgagttccaatgtgacgatgggaaatgt
atcccatacaagtgggtctgcgatggcagtgaagagtgcagggatgggtctgacgagttt
cccgagacctgccggcataaaacatgcagtcctgaccagtttagctgtggtgataggtca
aaccgatgtatccccaagtcatggcagtgtgatgaccaagaagactgtgaaaatggctcc
gatgagaaggattgtgctcgcaagccctgtgcctctgatgatcagttccagtgccgcagt
ggaatgtgcatctctctggaataccaatgtgacggtgaccacgactgcgatgacggcagc
gatgaagacacttgccctcctcccacttgtaatccagccttttttcaatgcaaaaactca
accctctgcatccccaaactatggacatgtgatggggatcctgactgtgaagacggctcc
gacgaggagagctgtgaaggaaaggagccgatcaagacggacaaaccctgctcctctttg
gagttccactgtgggagcggcgagtgtgtgcatatgagttggaagtgtgacggacagttt
gactgcaaggacaaatctgatgaaaaggactgtgaaaaaccaacctgcagcccagatcag
ttccagtgtaacaacgggaaatgcatccatggcagccggcagtgtgaccgacaatacgac
tgtgaagatctaagcgatgaaatgggctgtgtaaacgccacgaggtgtgagggccccgac
aagttcaagtgttcaagtggagaatgcatcagtatggaccaagtgtgtaacgttgccaaa
gactgtagagactggtcagatgaaccacttaaggagtgtgccctgaatgaatgcctggaa
aaaaatggtggctgctcccatatctgcaatgacctcaagattggatacgagtgtttatgc
ccggagggatatcgcctagttaatggaaggaaatgtaaagatattgacgaatgtctgcga
cctgatacctgcggccaaatctgcactaacttggaaggaagctacaagtgtgaatgctat
gatggctaccaaattgatccaaaaacagggtcctgcaagagcactggaacggtggcttac
ctcttcttcaccaaccgtcacgaggtgaggaagatgacgctggacaggagcgagtacaca
agtttcattccaagtcttaagaatgtcgtggcattagatatggagatagcaagcaataaa
atctactggtcggatttatcccagaagaaaatttacagtgctttaatggacaaggcccat
aacttttcccaccacgagactgtaatcagcaatgaaattgtatctccagacggtattgca
gtagattgggtccatgccaacctatactggacagactcttacattggcaccatctctgtg
gccaatactgccgggtccaagcgaaaaacactcttcagccaaggtctggctaagccacga
gatatagtggtggatcctacaaaagggtttatgtactggaccgactggggtgcccctgcc
aagattgagaagggtggtttgaatggagtagacagacaaactctggtcgacagtgatatt
gaatggcctaatggaatcacactggacctgacccatcagagactgtactgggtggattcc
aagttgcacactttgtccagcattgacgttactggagacaatagaaggaaggtcattgtc
gatgagcattccttatctcacccattcggcctcaccatctttgaggatctggtcttctgg
acggatattgacaatgaagctatattcagcgctaacaggctgaccggggaacaaatcacg
aaagttgcagaagatctgttatcgccagaagacatcgtcttgtatcacaatagaggacag
cctaaagctgaaaactggtgccagtctgaaaatggaggatgtgaatacctgtgtctgccg
gccccacaaatcactgcaggttcccccaagtttacttgtgtgtgtcctgatggagaacac
ctgggtacagacggcaagagctgtgtaaaaggaccaacatctacagccgcatttgtcagc
ttgactcctgtcacaacaacagcaactcccaagagcacgactttagcaaaactgatcacc
agcgcacctaggaggccttctactgctaagccccatcagcctacaacaaggccatcaacc
actgttacaacaaccactagtcagccaagcacaacacaaagcaccaaaagaaacctagat
ctctctacggcagggattacgagctccacagaatcacatcaaggagtgaataatggtgat
gtaaagatggagacttcagaatctcattctcattctagtgtcctctacgctgtgatacct
gttgttatactctgcttgctttcattcggaggctttctcttgtggagaaagtggagattg
aaaaacaccaatactattcactttgagaatcctgtataccagaaaacaacagaagaagat
gagattcacatatgtcggagtcaggatggatacacctatccttcaaggcagatgttgagc
tccgaagacgacattgcttga
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