KEGG   Bufo bufo (common toad): 120995843
Entry
120995843         CDS       T07950                                 
Name
(RefSeq) DNA dC->dU-editing enzyme APOBEC3-like
  KO
K18750  C->U-editing enzyme APOBEC3 [EC:3.5.4.-]
Organism
bbuf  Bufo bufo (common toad)
Pathway
bbuf03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:bbuf00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    120995843
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bbuf03019]
    120995843
Messenger RNA biogenesis [BR:bbuf03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     120995843
SSDB
Motif
Pfam: NAD1 APOBEC2 SNAD4 APOBEC_N NAD2 APOBEC4 APOBEC3 APOBEC4_like APOBEC1 APOBEC_C dCMP_cyt_deam_1 SNAD1 Ets TerB
Other DBs
NCBI-GeneID: 120995843
NCBI-ProteinID: XP_040281225
LinkDB
Position
3:complement(485920246..485937720)
AA seq 259 aa
MTIFIRNFLSEEEFDDNFNTIDLVKKTLVCFSLEDKKPLWKLWGYAYNDPKVEHAETIVL
RELKKYLGLNPTKKDSQYKITFYASYSPCLTCCEEICKFLNNNNEKVIMKLNISRFYNFH
DYDNKICLKILGKYGVQIKMMDMEDYKACFYLFVDPKVKFQPCEELDVQCERNEIDLDHL
WSEEFQVFEDNLLRRKGQNSAISFISEHLSPGHNRLQKDLTTPKKDEQETTSQAKTPVKL
PQIKDMDRKERFKRKLSFD
NT seq 780 nt   +upstreamnt  +downstreamnt
atgacgatatttatcagaaattttttatcagaagaagaatttgatgataattttaatact
atagatctggttaaaaaaacattagtctgctttagcctggaggacaagaaaccactatgg
aagctatggggttatgcatacaatgacccaaaagtggagcatgctgaaacaattgtttta
cgagagctcaaaaaatatttgggattgaatcctacaaaaaaagactctcaatataaaatc
acattttacgcatcttacagtccctgccttacctgttgtgaagaaatatgcaaatttctc
aataataacaatgaaaaagtaatcatgaaactgaatatttccagattctataattttcat
gattatgacaataaaatctgtttaaaaattctgggaaaatatggagtgcaaattaaaatg
atggatatggaagattataaggcatgcttttatctttttgtggatccaaaagtgaaattc
caaccctgcgaagaattagatgttcagtgtgaaagaaatgaaattgatctggatcatctc
tggagtgaggaatttcaggtatttgaagacaatttattaagaagaaagggacagaactca
gcaatatcatttatttctgagcatttgtcacccggtcacaacagactgcaaaaagatctt
acaacaccgaaaaaggatgaacaagagacgacatcacaagcaaagaccccagtgaagtta
ccccagataaaagatatggatcgcaaagagagatttaagagaaaactctcatttgactaa

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