Buteo buteo (common buzzard): 142037196
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Entry
142037196 CDS
T11399
Symbol
KDM2B
Name
(RefSeq) lysine-specific demethylase 2B isoform X1
KO
K10276
F-box and leucine-rich repeat protein 10/11 [EC:
1.14.11.27
]
Organism
bbut Buteo buteo (common buzzard)
Pathway
bbut03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
bbut00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
142037196 (KDM2B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bbut03000
]
142037196 (KDM2B)
04121 Ubiquitin system [BR:
bbut04121
]
142037196 (KDM2B)
03036 Chromosome and associated proteins [BR:
bbut03036
]
142037196 (KDM2B)
Enzymes [BR:
bbut01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.27 [histone H3]-dimethyl-L-lysine36 demethylase
142037196 (KDM2B)
Transcription factors [BR:
bbut03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
142037196 (KDM2B)
Ubiquitin system [BR:
bbut04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
142037196 (KDM2B)
Chromosome and associated proteins [BR:
bbut03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
142037196 (KDM2B)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
142037196 (KDM2B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
142037196
NCBI-ProteinID:
XP_074897418
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Position
11:30833568..30960595
Genome browser
AA seq
1302 aa
AA seq
DB search
MKLSKKMEAEKDSGRRLRSIGRRRYDENEDLSDVEEIVSIRSFNLEEKLKSKMYHGDFVH
AMDGKDFTFEYVQREALRVPLIFRNKDGLGIKMPDPDFTVRDVKLLVGSRRIVDVMDVNT
QKGVEMSMSQFVRYYETPEAQREKLYNVISLEFSHTKLENIVKRPNVVDLVDWVDNMWPQ
HLKERQTDATNALSEMKYPKVKKYCLMSVKGCFTDFHIDFGGTSVWYHVFRGGKIFWLIP
PTLQNLELYEEWVLSGKQSDIFLGDRVERCQRIELKQGYTFFIPSGWIHAVYTPVDSLVF
GGNILHSFNVPMQLRIYEIEDRTRVHAKFRYPFYYEMCWYVLERYVSCVTQRCHLSKEYQ
KESMLIDAKRKRSTDSYSSDSWLDMDEESCDAHIREEKDDSLDKNSKSLLDGSSSPNSTH
SEGKEGAERKQKATVMRYLKRTLSNESDDSVKSTTPTDYPKTPTGSPATEVSTKWTHLTE
FELKGLKALVEKLESLPENKKCVPEGIEDPQALLEDMKNILKEHADDDQNLAISGVPVVS
WPKKTTKNRAVGRPKGKLGTASAVKLAANRTTAGARRRRTRCRKCEACLRTECGECHFCK
DMKKFGGPGRMKQSCIMRQCIAPVLPHTAVCLVCGEAGKEDTVEEEESKFNLMLMECSIC
NEIIHPGCLKVKESDGVVNDELPNCWECPKCNHAGKTGKAYKQKRGPGFKYASNLPGSLL
KEQKINRDNKEVTDAAKRKGDCEETPRRKSEEHSKKTQVDSILRRKSDEVHLWRKRKFEK
PQEPTMRKRLKLGKEDKLFRKKRRSWKAPDDRTAMIKPLRRLKQEPEDDLPEAPPRSKDS
DQSRSSSPTAGPSTEGAEPRDKKKFKMRRKRRLPNKELSKELSKELNQEIQKTENSLANE
NHQPIKSEPESENEEPKRALNNSERLHRFSKGLNGTPRELRHQLIPSLRSAPRGITRPPP
SLSPPKCIQMERHVIRPPPISPPPDSLPLDDGAAHVMQREVWMAVFSYLSHRDLCICMRV
CKTWNRWCCDKRLWTKIDLNHCKSITPLMLSGIIRRQPVTLDLSWTNISKKQLSWLINRL
PGLRDLLLSGCSWIAVSALCSSSCPLLRTLDVQWAEGLKDAQMRDLLSPPTDNRPGCNGC
TLESMETLSSSSGKEQFCGSCHIRPDISSGQIDNRSKLRNIVELRLAGLDITDASLRLII
RHMPLLSKLNLSYCNHVTDQSINLLTAVGTTTRDSLTEINLSDCNKVTDQCLSYFKRCGN
ICQIDLRYCKQVTKEGCEQFIAEMSVSVQFGQVEEKLLQKLS
NT seq
3909 nt
NT seq
+upstream
nt +downstream
nt
atgaaactctccaaaaaaatggaggcagagaaagactctggaagaagattgcgatctatt
ggcagaaggcgatacgatgagaacgaggacctttcggacgtggaggaaattgtcagcatc
aggagtttcaatctggaagagaaattaaagagtaaaatgtatcacggggatttcgtccat
gccatggacgggaaagattttacttttgagtatgtgcaaagagaagctctcagagttccc
cttatcttcagaaataaggatggactgggaattaaaatgcctgacccggattttaccgtc
agagatgtgaagctattagtgggaagccgacggatagtggatgtgatggatgtgaacaca
cagaaaggtgttgaaatgagcatgtctcaatttgtgagatactatgaaacaccagaggcc
cagcgtgaaaaactctacaatgtcatcagcctggagttcagtcacacgaagctggagaac
attgtcaaacgccccaatgtggtggacttagtcgactgggtggataatatgtggccgcag
catttgaaggagagacagacggatgctaccaatgctctttcagagatgaaataccccaaa
gtgaaaaagtactgtttgatgagcgtgaaaggatgcttcactgattttcatattgatttt
ggtggcacttcagtgtggtatcacgttttccgtggggggaagatcttctggctgattccg
cctactctgcagaatctagaactttatgaagaatgggttctctcaggaaagcaaagtgat
atctttctgggagacagggtggaacgatgccaaagaattgagttgaaacagggctatacg
ttcttcattccttcagggtggatacacgcggtttatactccagtagattctctggtgttt
ggtggaaatatcctgcatagctttaatgttcccatgcagcttcgcatctatgaaattgag
gacagaacaagggtgcatgctaaattccgttatcctttctactatgaaatgtgctggtat
gttctggagagatacgtgtcctgtgtgacccagcgctgccacctcagcaaagagtaccag
aaagaatcaatgttaattgatgcaaaaagaaaacgcagcacagacagctattcatcagat
tcgtggttagacatggatgaagaatcttgtgatgcccatatccgggaggagaaggatgac
agcttggataagaactctaaatccttgttggatggctcctcctcacccaacagcacacac
tcagaagggaaggagggtgcagaaagaaaacaaaaagccacagtaatgagatacctaaaa
agaactttgtctaatgagtcggatgacagcgtaaaatcaacgacccccacggactatccc
aaaacaccaacagggtctccagctacagaagtttcaaccaaatggactcacctcacagaa
tttgaactgaagggtttaaaagccctggtggaaaagcttgaatctctcccagagaacaag
aagtgtgttccagaaggcatcgaagatccgcaggctctcctagaggacatgaagaacata
ctgaaggaacatgctgatgatgaccaaaatcttgccatttcgggtgtccctgtggtcagc
tggcccaagaagactacaaagaacagggcagtcggacggcccaaagggaaactgggcact
gcttctgcagtgaagcttgcagctaatcggacaaccgctggagcacgtcggaggaggacg
cgatgccgcaagtgcgaagcgtgtctgcggacagagtgcggcgagtgtcacttctgcaaa
gacatgaagaaatttgggggacctggcaggatgaaacagtcctgcattatgaggcagtgt
atcgcaccagtgttgcctcatactgctgtgtgtctggtgtgtggagaagctgggaaagag
gacactgtggaagaggaggagagcaagtttaatctcatgctaatggaatgctccatttgt
aatgaaatcatacacccaggatgccttaaggtgaaggaatcggatggtgtggttaacgat
gagctgccgaactgctgggagtgtccaaagtgcaaccatgcagggaaaactggaaaagcg
tacaagcaaaagcgcggaccaggattcaaatacgcatcaaatctcccaggctccttgctg
aaggaacagaaaattaacagagacaataaggaagtaacagatgctgcaaaacggaaaggg
gattgtgaagaaactcccaggcggaaatcggaggaacattccaaaaagactcaagttgac
tcaatactgaggagaaagtcagacgaagtgcatctgtggaggaaaaggaaatttgagaaa
ccccaggaacccactatgagaaagcggctaaaacttggaaaagaagacaaactcttcagg
aagaagcggcgatcgtggaaggctccagatgaccgaactgccatgatcaaacccctgcgg
cgcctcaagcaggagccagaggatgacctgccagaagcacctcccaggtccaaggatagt
gaccagtcacggtccagctcgcccactgcaggtcccagcacagagggtgccgagcccagg
gacaagaagaagttcaagatgaggaggaaaaggcggcttcccaataaggaactgagcaag
gagctcagcaaggagcttaaccaggagatccaaaaaaccgagaacagccttgccaatgag
aatcaccaacccatcaaatctgaacctgagagcgagaatgaggaacctaagcgtgctttg
aacaacagcgagagactccataggttcagcaaagggttaaacgggactccccgggagctg
aggcaccagctcatccccagcctgcgaagcgcacctcggggaataacccggccaccgcct
tcgctctctcctcccaaatgcattcagatggaacggcatgttatccggccgcctcccatc
agcccccctccggactcactccccctggatgatggggcagcccacgtgatgcagagggaa
gtctggatggctgtctttagctacctcagtcatagagacttgtgcatctgtatgagagtt
tgcaagacctggaacagatggtgctgtgacaaaagattatggaccaaaatagatttaaac
cattgtaaatccatcactccgcttatgcttagtggcattattaggagacagcctgtaacc
cttgatcttagctggacaaatatatctaaaaagcagctgagctggcttatcaacagactg
ccaggtcttcgagacctgctgttatcagggtgctcatggatagcagtgtcggcactttgt
agttccagttgtcctttactccgaactctggatgtgcagtgggcagaaggcctgaaagac
gcacaaatgagagacctcttgtcgccgcccacagataaccggccaggctgcaacgggtgt
actttagagagtatggaaacactttcttccagttcagggaaggagcagttctgtgggtca
tgccacattcgcccggatatcagctcaggtcagatcgacaaccggagtaaactacggaac
atagttgagctgcgtttggctggcctggatattacagatgcttctttgcggctgatcata
aggcacatgcctctgctctccaaactcaatctcagttactgtaatcatgtgacagatcag
tctattaacctgctgaccgcagttggaaccaccacgcgggattcattaacagaaattaat
ttatcagactgcaataaggttactgaccagtgcctgtcttacttcaaacgttgtggaaac
atctgccagattgatctgaggtactgcaagcaagtgacaaaagaaggctgtgagcagttc
atagcggaaatgtcagtaagtgttcagtttgggcaagtggaagaaaaacttctgcaaaaa
ctgagttag
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integrated database retrieval system
