Bifidobacterium breve ACS-071-V-Sch8b: HMPREF9228_0313
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Entry
HMPREF9228_0313 CDS
T01844
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
bbv
Bifidobacterium breve ACS-071-V-Sch8b
Pathway
bbv03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bbv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HMPREF9228_0313 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bbv03400
]
HMPREF9228_0313 (nth)
Enzymes [BR:
bbv01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
HMPREF9228_0313 (nth)
DNA repair and recombination proteins [BR:
bbv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HMPREF9228_0313 (nth)
Prokaryotic type
HMPREF9228_0313 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
RecR_HhH
HHH_5
EndIII_4Fe-2S
HHH_8
Motif
Other DBs
NCBI-ProteinID:
AEF27154
LinkDB
All DBs
Position
complement(386564..387232)
Genome browser
AA seq
222 aa
AA seq
DB search
MRETKTARIERMHKEYDILCRMIPQPQCALHFTSPLQLLIATVLSAQTTDKRVNTVTPEL
FATYPTAHDLAEASPAQIEDIIHPLGFYRSKTQHLIGLATALDERFDGQVPQSMDELTSL
PGVGRKTANVVLGNAFGIPGFPVDTHVMRVTGRLRWRSDWRSTHPDPVKIEREITACFPP
EEWTDLSHRLILFGRSTCHARTPDCANCPLAATCPSAGISAK
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atgcgagaaaccaaaaccgcgcgcatagagcgcatgcacaaggaatacgacattctatgc
cgtatgattccgcaaccgcagtgcgccctgcatttcacctccccgcttcaactgcttatc
gccactgtgctcagcgcccagaccaccgacaagcgtgtcaatacggtcacccccgaactg
ttcgccacgtatcccacggctcatgatttggcagaggccagcccggctcagatcgaggat
attatccatccgctcggcttctaccgatcgaaaacccagcatctcatcggcttggccacg
gcattggacgaacgctttgacggccaggtcccacaatcgatggatgagctgaccagcctg
ccaggcgttggccgcaaaaccgccaatgtggtgctgggcaacgctttcggcattcccggc
tttcccgtggacactcatgtgatgcgcgtgaccggtcgtctgcgctggcgatcggattgg
cgctccactcatccggatcccgtgaaaatcgagcgggagattaccgcatgcttcccacct
gaagagtggacggatctcagccatcggcttatcctgttcggccgatccacctgtcatgcc
cgcacgccggactgcgccaactgcccgctggccgccacctgccccagcgcaggcatcagc
gcgaaatag
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