Borreliella burgdorferi ZS7: BbuZS7_0562
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Entry
BbuZS7_0562 CDS
T00807
Symbol
ligA
Name
(GenBank) DNA ligase, NAD-dependent
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
bbz
Borreliella burgdorferi ZS7
Pathway
bbz03030
DNA replication
bbz03410
Base excision repair
bbz03420
Nucleotide excision repair
bbz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bbz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BbuZS7_0562 (ligA)
03410 Base excision repair
BbuZS7_0562 (ligA)
03420 Nucleotide excision repair
BbuZS7_0562 (ligA)
03430 Mismatch repair
BbuZS7_0562 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bbz03032
]
BbuZS7_0562 (ligA)
03400 DNA repair and recombination proteins [BR:
bbz03400
]
BbuZS7_0562 (ligA)
Enzymes [BR:
bbz01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
BbuZS7_0562 (ligA)
DNA replication proteins [BR:
bbz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
BbuZS7_0562 (ligA)
DNA repair and recombination proteins [BR:
bbz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
BbuZS7_0562 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BbuZS7_0562 (ligA)
MMR (mismatch excision repair)
DNA ligase
BbuZS7_0562 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
BbuZS7_0562 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
BRCT
HHH_5
PTCB-BRCT
DNA_ligase_ZBD
HHH_2
GerPB
CEBP_ZZ
Motif
Other DBs
NCBI-ProteinID:
ACK74727
UniProt:
B7J2B3
LinkDB
All DBs
Position
558219..560201
Genome browser
AA seq
660 aa
AA seq
DB search
MSSKVQQEIADLKKLIRKWDKEYYVDSLPSVEDFVYDKHILRLQELESKYPEYKTLDSPT
LKFGSDLLNDFKEVEHSAPILSLDKVYDLDLLKSWIDKIDFNNSFNISVEPKIDGCSIVL
YYKDGVLEKALTRGNGKFGNDVTINVRTIRYIPLFLDEKVDLVLRGEVYITKENFLKINK
FLEKPYTNSRNLASGILRRVDSREVANFPLNIFIYDFLNAGLEFKTNDLATARLKKLGFK
VNPLIRFFDLKNSIGEVLNYIADIIKKRDSFEYEIDGVVLKVSDFALRERLGYTAHHPKW
AMAYKFEALSDFSRVNSIVVQVGRSGKITPVANIDKVFVSGAFITSATLHNQDYIRSIGL
NVGDVVKVSRRGDVIPAVEMVINKFSTGFFKVPDNCPACKTAVVKEGAHFFCPNNNCPSV
AVERIKYFCSKNCMDIEGFSDKIISFLFEKKFIFSEIDLYTFDFYKLLEFKGFKDRKINN
LINSIEASKKKPFSKLLLSMGIKDLGENTIMLLFLNNLNSFSKLFKLCQDRYFAFSTLLK
IKGIGEKIALNIIEAFNDSVMLNKFKFFENLEFKMEEVVAIDGENKLLAGKKFCITGTFN
GYSRSIVIDKLKNKGAIFNTCVTGSLDFLIVGEKAGSKLKKALSLNIKIMSFEDIKSYLD
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcaaagtacagcaagaaattgcagacttgaagaagttgattagaaagtgggat
aaagaatattatgtcgattctttgcctagtgttgaagattttgtatatgataagcatatt
ttaaggcttcaagagctagaaagtaagtaccctgaatataagaccttagattctcctact
cttaaatttggcagcgatcttttaaatgattttaaagaggttgaacattctgcacctata
ttaagtcttgataaggtttatgatcttgatttgctaaaatcatggatagataagattgat
tttaataattcttttaatatttctgttgagccaaagattgatggatgttctatcgttctt
tattataaagatggcgttcttgaaaaagctcttactagaggtaatggaaaatttggtaat
gatgttactataaacgttagaaccattagatatatacctttatttcttgatgaaaaggtt
gatttagtattaaggggtgaggtttatattactaaagaaaattttttgaaaataaataaa
tttttggaaaagccttatacgaattctagaaatttggcttcgggaatacttagaagggtt
gatagtagagaagtcgctaattttcctttaaatattttcatttatgattttttgaatgct
ggattagaatttaaaaccaatgatttagctactgcaagacttaagaaattgggttttaaa
gtcaatcccttgattaggttttttgatctaaaaaattcaattggagaagttttaaattac
atagcagatataataaaaaaaagagattcttttgaatatgaaatagatggtgttgttctt
aaggttagtgattttgctttaagagaaagattggggtatactgcacatcatcccaaatgg
gcaatggcttacaaatttgaagcgctttcggattttagtagggtaaatagcattgttgtt
caggttggacgtagtggtaaaattactccggttgctaatattgataaagtttttgtttca
ggagcttttattactagtgcaacgttacacaatcaagattatataaggtctattggtttg
aatgttggtgatgttgttaaagtttcaagaagaggagatgtaattcctgctgttgaaatg
gtgataaataaattttcaacaggatttttcaaagttcctgataattgtccagcttgtaaa
acggctgtagtaaaagagggggcacattttttttgtccaaataataattgtccttcagta
gcagttgagagaataaaatatttttgtagtaaaaattgtatggatattgaagggttttcc
gacaagataatttcttttctttttgagaaaaaatttattttttcagaaattgatctttat
acttttgatttttataagcttcttgaatttaaagggtttaaagatagaaagataaataat
ttgataaattcaattgaagctagcaaaaaaaagccatttagtaaattacttcttagtatg
ggaattaaagatttaggggaaaatacaataatgttgttgtttcttaataatttaaattca
ttttcaaagctttttaagctttgtcaagacagatattttgcattttcaacattgttgaaa
attaaaggcataggagaaaaaattgctttaaatattattgaagcttttaatgattcagta
atgcttaataagtttaaattttttgaaaatttggaatttaaaatggaagaggttgttgcg
attgatggtgagaataagttattggccggtaaaaagttttgcattactggaacttttaat
ggttattccaggtctattgttattgataagctaaaaaataaaggagcaatttttaatact
tgtgtgactgggagtttagattttcttattgtaggagaaaaagctggatcaaagcttaaa
aaagctttgagtttaaatataaaaattatgtcttttgaagacataaaaagttacttagat
tag
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