Bacillus carboniphilus: LC087_02475
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Entry
LC087_02475 CDS
T09277
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
bcao
Bacillus carboniphilus
Pathway
bcao01501
beta-Lactam resistance
bcao01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
bcao00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LC087_02475
01503 Cationic antimicrobial peptide (CAMP) resistance
LC087_02475
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bcao02000
]
LC087_02475
01504 Antimicrobial resistance genes [BR:
bcao01504
]
LC087_02475
Transporters [BR:
bcao02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
LC087_02475
Antimicrobial resistance genes [BR:
bcao01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
LC087_02475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
DUF2207_C
DUF5790
Motif
Other DBs
NCBI-ProteinID:
WLR43093
LinkDB
All DBs
Position
480581..483826
Genome browser
AA seq
1081 aa
AA seq
DB search
MKLSRFSIRRPVFTIVTMFLVIILGIVSLLNIPMKLIPEINPPIGVVVTNYEGASPEEVV
EKVSKPLEEALSTVEGLNTISSTSEENASLVLLRFSWTSDIDEVQDEIMSSMENIPLPEG
AEDPRFLKFDPSQFPIIQLSLTSTSDNKQLQDLADDLKQELTKAEGVASVNLSGLSSEQV
SVLLDQEKLKQYNLTQSEIVDVVRSNKISLPGDQITTDGKQLTTRVISTIDSLDILRDLV
VTRDAQGEKITLDQVATVEIKEIEKKSITRANQESSVLVSVLQQSDANTAEVSENFQERL
DELLEDEKYESVKADILFDQGDYIEQAINNMMRTLLLGGLFAMIVLFLFLRSVKSPLIIG
VAIPYSVIVTFVLIYFSDFTLNIMTLGGLALGIGMLVDNAIVVIENIYRHLSMGKSSKEA
AYEGAKEMGPAIIASTLTTVAVFVPVVFIQGLIGQLFKEFAMTIAFSLFASLFVALTVVP
MLASKWLKVPKENVENKRQESRFMQSLESLVKWALRRRGFVLTLTLVIFLGSLAGLYRVG
AVFLPATDEGYFSVGIELENGTSLEETKKVINAVEKELEDKDDVDVYVSLIGSNQEESFR
GTGQTNIAEMYVNMVPLDKRDQSTFDFVDDIERDIESTARNVNKTAEVTFNLQSSTGSEP
NTLSFNVRNADEEQLKEDVEKIASAIDELEDVTNVVTDLSDTVEELQITVDREKALDKGL
VPGQIATVVNQVTRGTDAIQITNADNNEIYMVNVQYDETVTENIGSLEKLLIKTPLDEFV
QLSEVATIEKGEGPTEINRIEKENAVEVSVKYNNTTNLGEISQKVDEEIEELELDEDETK
ITFSGDRELLENNIDDMLLAFVLAIVFIYIVMAAQFESFKYPLVIMFTVPLMIVGVSIAL
VLTNTPLSLTVIIGIIVLAGIVVNNAIVIVDYINQLKEDGMKSYDAIVKAVKVRLRPVLM
TASTTILGLLPLAIGLGEGTEINQPLGVSVIGGLITSTLLTLLVIPVVYSLFDKQTRKLN
KKYATPDGQLIPAYLLEEKIEREEEQAESTEIAETPKDKQQMVKMLEQMIEIVKKDDKEN
R
NT seq
3246 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgagtcgtttctcgattagaagacctgtttttacgatcgttaccatgttttta
gttattattctagggattgtttctttactgaatattcctatgaaactcattcctgaaatt
aatccacctattggagttgttgtcaccaattatgaaggggcaagtccagaagaagtagtg
gagaaagtatctaaacctctagaagaagcgttatctactgtagagggtttaaataccatt
tcctctacatctgaagaaaatgcaagtcttgtattattacggttttcatggacttcagat
attgacgaagtgcaagatgaaatcatgagtagtatggaaaatataccactcccagagggt
gcagaggatcctcggtttttaaagtttgatcctagtcagtttcctattattcaattatca
ttaacatcaacttcagataacaaacagcttcaagatttagctgatgatttaaagcaagag
ctgacaaaagctgaaggagttgcaagtgttaatttatctggtctttcttcagaacaagtt
agtgtattattagatcaggaaaaattaaaacaatataatttaactcagtctgaaatcgta
gatgtagtgagaagcaataaaatatccttacctggtgatcaaatcacaacagacgggaag
caattgacaacgagagtgatcagtactattgattctcttgatattttaagggatcttgtg
gttactcgagatgcacaaggggaaaaaataacgttagaccaagtcgctactgtagaaata
aaagagatagagaaaaagtcaatcacaagagccaatcaagagtcttccgtattagtaagt
gtccttcagcaatcggatgccaatacagctgaagtatcagaaaattttcaagaacgtctt
gatgaactacttgaggatgaaaaatacgaatctgttaaggcagatattttatttgatcaa
ggggactatattgaacaagcaatcaataatatgatgagaacccttttactgggcggattg
tttgcaatgattgttttgttcttatttttacggagtgtgaaatcaccactcattatcgga
gtggccattccttattctgttattgtgacctttgtgctcatttacttttctgatttcacc
ttaaatattatgactttaggtggtcttgccttaggaataggaatgttagtggataatgct
attgtggtgattgaaaatatatataggcatctatcgatgggtaagtcttctaaagaagca
gcttatgagggcgcaaaagaaatgggcccagcgattattgcttcgactttaacgactgtt
gctgtttttgttccagttgtctttattcaaggattaatcggtcagctctttaaagaattt
gcgatgacgattgcgtttagtttatttgcttctttatttgtagcattaacggttgtaccg
atgttagcaagcaaatggttgaaagtaccaaaagaaaatgtagagaataagcgtcaagaa
tctcgttttatgcaatcgttagaatcactcgtgaagtgggctttaagaagaagagggttc
gttcttacacttacgcttgtcatctttttagggagtcttgcaggactctatcgagtaggt
gcagttttcttaccagctacggatgaaggatatttttcagttggaatcgagctggaaaat
gggacttctctagaagagacaaaaaaagtgattaatgcagtagaaaaagaactagaagat
aaagatgatgtagatgtttatgtaagtttaataggatcgaatcaggaagagtcctttaga
ggaacaggacaaacgaatattgcagagatgtatgtcaatatggttccacttgataagcgt
gatcaatccacctttgattttgtggatgatattgaaagagatatcgagagtactgcccgt
aacgtcaacaaaacagcagaagttacctttaacttacagtcttcaacagggtcagaacct
aacacgttatcgtttaacgttcgaaatgctgatgaagaacaattgaaggaagatgttgaa
aagattgcatcggcgattgatgaacttgaagatgttactaatgtagtgacagatctaagt
gatacggttgaagaactacaaataacggtcgatcgggaaaaagctcttgataaagggtta
gttccgggacaaattgcaacagtggtcaaccaagtgacgcgtggaacagatgcaattcaa
atcacgaacgcagataacaacgaaatttatatggtcaacgttcaatatgatgaaaccgta
actgaaaatatcggttcattagagaagctgttgattaaaacacctctagatgagtttgtt
caattaagcgaagttgctacgattgaaaaaggagaaggtccgacagaaataaaccgaatc
gaaaaagaaaatgctgtagaagtttcggttaaatataacaatacaacgaatttaggagaa
atttctcaaaaagtagatgaagagatcgaggaattagagttagatgaggatgaaacaaag
atcacgttctctggtgaccgtgagcttttagaaaataacattgatgatatgctgttagcc
tttgttcttgccattgtgtttatttatattgtgatggctgctcaatttgagtcctttaaa
tatccacttgtgattatgtttactgttccactcatgattgtaggagtatcgatcgcgctt
gttttaactaatacgccgttaagtttaacagtcataattggtatcatcgtcctagctggt
atcgtcgtaaataatgccattgtgattgttgactatattaatcaactaaaagaggatgga
atgaaatcgtatgatgccattgtgaaggccgtgaaagttcgattacgacctgtgttgatg
acagcttctacaacgattctcggattattacctctagcgataggtttaggagaaggtacg
gaaattaatcagcctcttggagtgagtgtcataggtggattaattacaagtacactttta
accttgttagttattccagttgtgtatagtttatttgataaacaaacgagaaaactaaac
aaaaaatatgcgactcctgatggacaattaataccagcttatttattagaagaaaaaatt
gaaagagaagaagaacaagcagaatcgactgaaattgctgaaacgcctaaagataaacag
caaatggtgaaaatgcttgagcaaatgattgaaattgtaaaaaaggacgacaaagaaaat
aggtaa
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