Bacillus carboniphilus: LC087_06085
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Entry
LC087_06085 CDS
T09277
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
bcao
Bacillus carboniphilus
Pathway
bcao03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bcao00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LC087_06085 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bcao03400
]
LC087_06085 (nth)
Enzymes [BR:
bcao01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
LC087_06085 (nth)
DNA repair and recombination proteins [BR:
bcao03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LC087_06085 (nth)
Prokaryotic type
LC087_06085 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
HHH_5
RecR_HhH
EndIII_4Fe-2S
HHH_8
Motif
Other DBs
NCBI-ProteinID:
WLR43705
LinkDB
All DBs
Position
complement(1197535..1198185)
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AA seq
216 aa
AA seq
DB search
MLTKAQINHAIETMAEMFPDAHCELNHRNPFDLVIAVLLSAQCTDALVNRVTTELFKKYE
TPQDYLSVSIEELQNDIRSIGLYRNKAKNIQKLCQMLIENYHGEVPKDRDELINLPGVGR
KTANVVVSVAYDIPAIAVDTHVERVSKRLGICRWKDSVLEVEKTLMRKIPETLWSDTHHR
MIFFGRYHCKAQTPQCDVCTLLSLCREGKKRMKGKI
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atgttaacaaaagcacaaattaatcatgctattgagactatggcagaaatgtttccagat
gctcattgtgagcttaaccaccgcaacccgtttgatcttgtcattgcggtgcttttatct
gcccaatgtacagatgctttagtgaaccgagtaacaacggagctatttaaaaagtatgaa
acccctcaagactatctttccgtttcgatagaagaactacaaaatgatatccgatcgatt
ggtctatataggaataaagcgaaaaatattcaaaagctttgtcaaatgttaatagaaaac
tatcatggtgaagtccctaaagacagggatgaacttattaaccttccaggagtcggaaga
aaaacagcgaacgtggtcgtctcagtggcttatgatattcctgcgattgctgtcgataca
catgtagaacgagtgagtaaaaggttggggatttgcaggtggaaagattcggtacttgaa
gtagagaaaacgttgatgagaaagattccagagacactatggagtgatacgcatcatcga
atgattttttttggccgttatcattgtaaagctcaaacccctcaatgtgacgtatgcacg
ttactttctctttgccgtgaaggaaaaaagcgtatgaaaggaaagatatga
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