KEGG   Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043: BBCT_1282
Entry
BBCT_1282         CDS       T03931                                 
Name
(GenBank) CRISPR-associated protein
  KO
K19125  CRISPR system Cascade subunit CasD
Organism
bcat  Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043
Brite
KEGG Orthology (KO) [BR:bcat00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:bcat02048]
    BBCT_1282
Prokaryotic defense system [BR:bcat02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Subtype I-E factors
    BBCT_1282
SSDB
Motif
Pfam: Cas_Cas5d
Other DBs
NCBI-ProteinID: BAR02250
LinkDB
Position
complement(1512764..1513513)
AA seq 249 aa
MSVLLLQLAGPLQSWGDSSRFVRRETRSEPTKSGVIGMLASAQGRTREDPIEDLLGISFG
VRVEQRGRVIRDLQTEKSLTRKRNSRKFDKEMPLTYRYYLADACFLVALGADRSVLEMLD
EAIHSPKWPLYLGRRSCPPNYPLSLGIHDEYEDIRQALNSETWHASEWYRRRYRYPDLEI
VCDAEKGENITTQSDLPLSFSREGRRYANRAVHRYRIPNPDKPVEKGAKDSIRPPSFEST
GESDPMNFI
NT seq 750 nt   +upstreamnt  +downstreamnt
atgagcgttctgttattgcaattggccggcccattgcagtcatggggcgattcttcgcga
ttcgttcggcgcgagactcgtagcgaaccaaccaaaagcggtgtgattggcatgctagct
tcggcgcaagggcgtacccgggaggatcccatagaggatttgctaggcatatcgtttggt
gtgcgtgtggagcaacgtggcagggtaatccgtgatttgcagaccgaaaaatccttgaca
aggaaacgtaactccagaaagttcgacaaggagatgccgctgacttatcggtattatctg
gctgatgcttgttttctggtcgcgctcggtgccgatcgttcagttctggaaatgttggat
gaggcgattcattcgccgaaatggccgttgtatctaggtcgacgttcgtgcccgccgaat
tatccgctgtcgttgggcatccatgatgagtatgaggatattcgtcaggctctgaattcc
gagacgtggcacgcttcggaatggtatcggaggcgttacaggtacccggatctggaaatt
gtctgtgacgcggagaaaggcgaaaacataacgacgcaatctgacttgccgttaagcttc
agccgagaaggccggcgttatgcgaatcgtgcggtgcaccgttaccgcattcctaaccct
gataagcccgtggaaaaaggcgcaaaggatagtatacgacctccttcctttgaatctacc
ggtgaatcggatccgatgaatttcatctag

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