Borreliella carolinensis: QIA18_03045
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Entry
QIA18_03045 CDS
T09353
Symbol
ligA
Name
(GenBank) NAD-dependent DNA ligase LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
bcaz
Borreliella carolinensis
Pathway
bcaz03030
DNA replication
bcaz03410
Base excision repair
bcaz03420
Nucleotide excision repair
bcaz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bcaz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
QIA18_03045 (ligA)
03410 Base excision repair
QIA18_03045 (ligA)
03420 Nucleotide excision repair
QIA18_03045 (ligA)
03430 Mismatch repair
QIA18_03045 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bcaz03032
]
QIA18_03045 (ligA)
03400 DNA repair and recombination proteins [BR:
bcaz03400
]
QIA18_03045 (ligA)
Enzymes [BR:
bcaz01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
QIA18_03045 (ligA)
DNA replication proteins [BR:
bcaz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
QIA18_03045 (ligA)
DNA repair and recombination proteins [BR:
bcaz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
QIA18_03045 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
QIA18_03045 (ligA)
MMR (mismatch excision repair)
DNA ligase
QIA18_03045 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
QIA18_03045 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
BRCT
PTCB-BRCT
HHH_5
DNA_ligase_ZBD
ELYS-bb
HHH_2
GerPB
COMM_HN
Motif
Other DBs
NCBI-ProteinID:
WKC90921
LinkDB
All DBs
Position
560185..562167
Genome browser
AA seq
660 aa
AA seq
DB search
MSNKVQQEIANLKKLIRKWDKEYYVDSLPSVEDFVYDKHILRLKELESKYPEYKTLDSPT
LKFGSDLLNDFKEVEHSAPILSLDKVYDLNLLKSWIDKIDFNNSFNISVEPKIDGCSIVL
YYKYGILEKALTRGNGKFGNDVTKNIRTIRYIPLFLDEKVDLVLRGEVYITKENFLEINK
FLEKPYTNSRNLASGILRRVDSREVANFPLNIFIYDFLNAGLEFKTNDLATERLKKLGFK
VNPLIRFFDQKSSIGEVLDYIADIAKKRDSFEYEIDGVVLKVSDFALRERLGYTAHHPKW
AMAYKFEALSGVSRVNSIVVQVGRSGKITPVANIDKVFVSGAFITSATLHNQDYIISIDL
NVGDVVKVSRRGDVIPAVEMVITKFSTGFFKVPNNCPSCKNVVVKEGAHFFCTNNNCPSV
AVERIKYFCSKNCMDIEGFSDKIISFLFEKKFISSEIDLYTFDFYKLLKFKGFKDRKINN
LINSIESSKKKPFSKLLLSMGIKDLGENSIRLLFLNNLNSFSKLFKLCQDKDFAFSTLLK
IKGIGKKIALNIIGAFNDSIMLDKFKFFENLKFKMEEFITIDDENKSLVGKKFCITGTFN
GYSRPIVIDKLKNKGAIFNTCVTKSLDFLIVGEKAGSKLKKALSLNIKIMSFKDIKSYLD
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacaaagtacagcaagaaattgcaaaccttaagaagttgattagaaagtgggat
aaagagtattatgttgactctttgcccagtgttgaagattttgtgtatgataagcatatt
ttaaggcttaaagagctagaaagtaagtaccccgaatataagaccttagattctcctact
cttaaatttggcagtgatcttttaaatgactttaaagaggttgaacattctgctcctata
ttaagtcttgataaggtttatgatcttaatttgctaaaatcatggatagataagattgat
tttaataattcttttaatatttctgttgagccaaagattgatggatgttctattgttctt
tattataaatatgggattcttgaaaaagctcttactaggggtaatggaaaatttggtaat
gacgttactaaaaacattagaaccattaggtatatccctttatttcttgatgaaaaggtt
gatttagtattaaggggtgaggtttatattactaaagaaaattttttagaaataaataaa
tttttagaaaagccttatactaattctagaaatttggcttcgggaatacttagaagggtt
gatagtagagaagttgctaatttccctttaaatattttcatttatgattttttaaatgct
ggattggagtttaaaaccaatgatttagctactgaaagacttaagaaattggggtttaaa
gtaaatcctctgattaggttttttgatcaaaaaagttcaattggcgaagttttagattat
atagcagatatagcaaaaaaaagagattcttttgaatatgaaatagatggcgttgttctt
aaggttagtgattttgctttaagagaaagattggggtatactgcgcatcatcctaaatgg
gcaatggcttacaaatttgaagcgctttccggtgttagtagggtaaatagcattgttgtt
caggttggacgtagtggtaaaattactcctgttgcaaatattgataaagtttttgtttct
ggggcttttattactagcgcaacattacataatcaagattatataatatctattgatttg
aatgttggtgatgttgttaaagtttcaagaagaggagatgtaatccccgctgttgaaatg
gtgataaccaaattttcaacaggatttttcaaagttcctaacaattgtccatcttgtaaa
aacgttgtagtaaaagagggggcacattttttttgtacaaataataattgtccctcagta
gcagtcgagagaataaaatatttttgtagtaaaaattgtatggatattgaggggttttcc
gacaagataatttcttttctttttgagaaaaaatttatttcttcagaaattgatctttat
acatttgatttttataaacttcttaaatttaaagggtttaaagatagaaagataaataat
ttgataaattcaattgaatctagcaaaaaaaagccatttagcaaattacttcttagcatg
ggaattaaagatttaggagaaaactcaataaggttgttatttcttaataatttaaattcg
ttttcaaaactttttaagctttgccaagataaagattttgctttttcaacattgttgaaa
attaaaggcatagggaaaaaaattgctttaaatattattggagcttttaatgattcgata
atgcttgataagtttaaattttttgaaaacttgaaatttaaaatggaagagtttattacg
attgatgatgagaataagtcgttagttggtaaaaagttttgcattactggaactttcaat
ggttattccaggcctattgttattgacaagttgaaaaataaaggagcaatttttaacact
tgcgtgactaagagtttggattttcttattgtaggagaaaaagccggatcgaaacttaaa
aaagctttgagtttaaatataaaaattatgtcttttaaagacataaaaagttatttagat
taa
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