Burkholderia cepacia DDS 7H-2: DM42_5874
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Entry
DM42_5874 CDS
T03302
Name
(GenBank) RND transporter, hydrophobe/amphiphile efflux-1 family protein
KO
K18146
multidrug efflux pump
Organism
bced
Burkholderia cepacia DDS 7H-2
Pathway
bced01501
beta-Lactam resistance
Module
bced_M00649
Multidrug resistance, efflux pump AdeABC
Brite
KEGG Orthology (KO) [BR:
bced00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
DM42_5874
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bced02000
]
DM42_5874
01504 Antimicrobial resistance genes [BR:
bced01504
]
DM42_5874
Transporters [BR:
bced02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
DM42_5874
Antimicrobial resistance genes [BR:
bced01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AdeABC [MD:
M00649
]
DM42_5874
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
AIO46130
LinkDB
All DBs
Position
2:complement(2621325..2624468)
Genome browser
AA seq
1047 aa
AA seq
DB search
MSQFFIRRPVFAWVIALFIILLGLIAIPELPVARYPSVAPPTVTITATYPGATPQTMSDS
VLSLIERELSGVRNLLYFESSADTSGQAQITATFKPGTDSAMAQVDVQNKLKSVEPRLPP
VVRQNGVIVQSAATGFLLFVGLKSDSGRYDENALADYMARNVVEDLRRVEGVGKVQLFGS
EQAMRIWVDPQKLITYGLSMNDLTTAVSQQNVQIAPGSLGAAPAMRGQRVTVPLTAQGQL
TTPEQFAKIVLRANANGSKVVLGDVARVELGPQAFTFVNSENGKPATFAGVQLAPGANAV
KTAEAVREQLDMIAKTMPAGMTYSIPFDTAPFVKISIEKVIHTLLEAMVLVFLVMYLFLQ
NVRYTLIPAIVAPVAMLGTFAVMLMTGFSINVLTMFGMVLAIGIIVDDAIVVVENVERLM
VEEGLSPKDATIKAMKEITGAIIGITLVLTAVFLPMAMSSGSVGVIYQQFTLSMAVSILF
SALLALTLTPALCATMLKPIEHGHHEKRGFFGWFNRRFDRLTGWYETRVGRLVGRTGRVM
LLFVAISAALVFGFRMLPSSFLPEEDQGYFMTGFLLPADSTVERTGDVVKTLEKHLASRP
AIQSSISIIGYGFSGLGSNAALNYAVLKDWGKREGSSTMEEAMHAQAAMGGVTEGTVMSL
LPPAIDGLGTSSGFTMRLQDRANQGYAALKAAEMKLLELAAQSKIVTGVYPDSLPAGTSV
KLDIDRDKAEALGVSFTTISDTLSAAMGSTYVNDFPNAGRMQQVIIQADAPARMQIDNVM
KLYVRNAAGGMVPLSEVVRPVWSETPLQLVRFQGYPSARISGGSAPGYSSGAAMAEMERL
ATQLPPGFTVAWTGQSLQERESASQAPMLMALSMVVVFLVLAALYESWAIPLSVMLVVPL
GLIGALAAVMLRGLPNDVFFKVGMITVIGLSAKNAILIVEFAKQLREEGKGLIEAAVQSS
KLRLRPILMTSLAFGLGVVPLMIATGASAETQHAIGTGVFGGMVAATVLAIFFVPVFFVF
VMSIQERISAWLASGKKRANVTPEQEG
NT seq
3144 nt
NT seq
+upstream
nt +downstream
nt
atgtcccaattcttcatccgccgcccggtcttcgcgtgggtgatcgccctcttcatcatc
ctgctgggcctgatcgccattcccgaactgccggttgcgcgctatccgtcggtcgcaccg
ccgaccgttaccattaccgccacctacccgggcgcgacgccgcagacgatgagcgacagt
gtgctgagcctcatcgagcgcgagctgtctggcgtgcggaaccttctgtacttcgaatcg
tcggccgatacttcgggccaggcgcagatcaccgcgaccttcaagcccggtactgattcg
gcaatggcccaggtggacgtacagaacaagctcaagtcggtcgaaccgcgcctgccgccg
gtcgtgcggcagaacggcgtgatcgtgcagtctgccgccactggcttcctgctgttcgtc
ggcctcaagtcggacagcggccgctatgacgaaaacgcgctggccgactacatggcgcgc
aacgtcgtcgaggatctgcgacgtgtcgaaggcgtcggcaaggtgcaactgttcggttcg
gaacaggccatgcgcatctgggtcgatccgcagaagctgatcacctacggtctgtcgatg
aacgacctgaccactgccgtcagccagcagaacgtacagatcgcgccgggcagcctcggg
gctgcgcctgcgatgcggggccagcgcgtgacggtgccgctcaccgcgcaaggccagctc
acgacgccggagcagttcgccaagatcgtgctgcgcgcgaacgcgaacggctcgaaggtc
gtgctcggcgatgtcgcacgggtcgaactcggcccgcaggcgttcaccttcgtgaacagc
gagaacggcaagccggccactttcgccggcgtgcagctggcgccgggcgccaatgcggtg
aagaccgcggaagccgtgcgcgagcaactggacatgatcgccaaaaccatgccggccggc
atgacctactcgatcccgttcgataccgcaccgttcgtgaagatctcgatcgagaaggtg
attcacacgctgctcgaagcgatggtgctcgtgttcctggtgatgtacctgttcctgcag
aacgtgcgctatacgctgatcccggccatcgtcgcgccggtcgcgatgctcggcacgttc
gcggtgatgctgatgaccggtttctcgatcaacgtgctgacgatgttcggcatggtgctc
gcgatcggcatcatcgtcgacgatgcaatcgtcgtcgtcgaaaacgtcgagcgcctgatg
gtcgaagaagggctgtcgccgaaggatgcaacgatcaaggccatgaaggaaattaccggc
gcgatcatcggcatcacgctggtgctgaccgccgtgttcctgccgatggcgatgtcgagc
ggctcggtcggtgtgatctatcagcagttcacgttgtcgatggccgtgtcgatcctgttc
tccgcgctgctcgcgctgacgctcacaccagccctgtgcgcgacgatgctcaagccgatc
gagcatgggcaccatgagaaacgcggcttcttcggctggttcaatcgccgcttcgatcgc
ctgacgggctggtacgagacgcgcgtgggccgcctggtcggccgcacgggccgcgtcatg
ctgctgttcgtcgcgatttccgcggcactggtattcggcttccgcatgcttccgtcgtcg
ttcctgcccgaagaagaccagggttacttcatgaccggcttcctgctcccggcggattcg
accgtcgagcgcacgggcgacgtggtcaagacgctcgagaagcacctcgcctcgcgcccg
gcgatccagtcgagcatctccatcatcggctacggcttctccggtctcggttccaacgcg
gcactgaactacgcggtcctcaaggactggggcaagcgggaaggttcgtccacgatggaa
gaagcgatgcacgcgcaggctgcaatggggggcgtgaccgaaggtacggtcatgagcctg
ctgccgccggccattgacgggctgggcaccagctcgggattcacgatgcgcctgcaggat
cgtgccaaccagggttatgccgcgctcaaggcagcagagatgaagctgctcgaactggcc
gcccaaagcaagatcgtgacgggggtctatccggacagcctgccggccggcacgagcgtg
aagctggatatcgaccgcgacaaggccgaagcgctaggcgtgtcgttcacgaccatcagc
gatacgttgtcggccgcgatgggctcgacctatgtgaacgacttcccgaacgcgggccgc
atgcagcaggtgatcatccaggccgatgccccggcacgcatgcagatcgacaacgtgatg
aagctctacgtgcgcaacgcggccggcggcatggtgccgttgtccgaagtggtgcgtccg
gtctggtcagagaccccgctccagttggtgcgcttccagggttatccgtccgcacgcatc
tccggcggttcggcacccggctactccagcggcgcggcgatggccgagatggagcgcctg
gccacgcagttgccgccgggcttcacggtggcgtggacgggccagtccctgcaggagcgc
gagtcggcctctcaggcgccgatgctgatggcgctgtcgatggtcgtcgtgtttctggtg
ctcgcggcgctctacgagagctgggctattccgctgtcggtgatgctggtggtgccgctc
gggctgatcggcgcactcgccgcggtcatgctccgcgggctgccgaacgacgtgttcttc
aaggtcgggatgatcaccgtgatcggcctgtctgccaagaatgccatcctgatcgtggaa
ttcgcgaagcaattgcgcgaggaaggtaaggggctgatcgaggcggccgtgcagtcgtcg
aagctgcgcctgcgcccgatcctgatgacctcgctcgcgttcggcctcggcgtcgtgcct
ttgatgatcgcaaccggcgccagcgccgaaacgcagcacgcgatcggtaccggtgtgttc
ggcggcatggtcgccgccaccgtgctggccattttcttcgtgccggttttctttgtgttc
gtgatgagcatccaggaacgcatctcggcatggctcgcgtctggcaagaagcgcgccaac
gtgacccccgaacaagaaggttga
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