Burkholderia cepacia DDS 7H-2: DM42_7235
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Entry
DM42_7235 CDS
T03302
Name
(GenBank) efflux transporter, outer membrane factor (OMF) lipo, NodT family protein
KO
K18903
outer membrane protein, multidrug efflux system
Organism
bced
Burkholderia cepacia DDS 7H-2
Module
bced_M00698
Multidrug resistance, efflux pump BpeEF-OprC
Brite
KEGG Orthology (KO) [BR:
bced00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bced02000
]
DM42_7235
01504 Antimicrobial resistance genes [BR:
bced01504
]
DM42_7235
Transporters [BR:
bced02000
]
Other transporters
Pores ion channels [TC:
1
]
DM42_7235
Antimicrobial resistance genes [BR:
bced01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump BpeEF-OprC [MD:
M00698
]
DM42_7235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
AIO43861
LinkDB
All DBs
Position
3:942127..943563
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AA seq
478 aa
AA seq
DB search
MTRVFALLAASLLAACSIAPQPLAPVPVGHDGFRHADPATDARAPSLAAWPVWFGDPQLG
RLVDAALAHNLDIRAAAAHVDQAQALLGVREAALAPTVRVDPSFSRTRVSGTVDNALPKR
TMHNWSVPVAASYEVDLWGRLRGDADVSEQNLLQTAADRDAVRLRVATEVAVDYLTLRYV
DDDLVTLTRAIGLRRTALDVIAARVRAGAASDLDGLRAAADLDTAHADLAESRRLRENLV
DAIAVLTGVSPTAFDVDAGAVPVQVPEVPAGLPSALLAQRPDVFAAARRADAASLELGIA
RTAWLPTLTLTADGGFATRDLRSFLDRNSSLWSLGANVALTLFDGGKRDAAVAAARAGTN
VADANYRATAIGALRDVQDALNDIAAQKERIVRYDSAARATDAAARLSLSRYAHGYVSYL
EVIDADRDALNARRQLIHSRQALAVATVSLVRALGGGWTPSARAGRGGLHDATQADAR
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgacgcgcgtcttcgccctgctcgccgcgagcctgctggccgcgtgctcgatcgcaccg
cagccgctcgcgcccgtcccggtcggacacgacgggttccgccatgccgatccggcgacc
gatgcgcgcgcgccgtcgctcgccgcgtggcccgtgtggttcggcgacccgcagctcggc
cgcctcgtcgacgccgcgctcgcgcacaacctcgacatccgcgcggcggccgcgcacgtc
gaccaggcgcaggcgctgctcggtgtgcgcgaggccgcgctggcgccgaccgtgcgcgtc
gacccgtcgttcagccgcacgcgagtgtccggcacggtcgacaacgcgctgccgaagcgc
acgatgcacaactggtcggtacccgtcgccgcgagttatgaagtcgatctatggggccgc
ttgcggggcgatgccgacgtcagcgaacagaacctgctgcagacggcggccgaccgcgat
gcggtgcgtctgcgggtggcgaccgaagtggccgtcgactatctgacgctgcgctacgtc
gacgacgatctcgtgacgctcacgcgcgcgatcgggctgcggcgcaccgcgctcgacgtg
atcgccgcccgcgtgcgggccggcgcggcgagcgatctcgacgggctgcgcgcagcggcc
gatctcgataccgcgcatgccgatctcgcggaaagccgccggctgcgcgagaacctcgtc
gacgccattgcagtgctgaccggcgtgtcgccgaccgcgttcgacgtcgacgcgggcgcc
gtgcccgtgcaggtgccggaggtgccggccgggctgccgtccgcgctgctcgcccaacgc
ccggacgtattcgcggcggcgcggcgcgccgatgcggcatcgctcgaactggggatcgcg
cgcaccgcgtggctgccgacgctgacgctgaccgccgacggcggtttcgccacccgcgac
ctgcgctcgtttctcgaccgcaacagctcgctgtggagtctcggcgcgaacgtcgcgctg
acgctgttcgacggcggcaagcgcgatgccgcggtggccgccgcgcgagccggcacgaac
gtggccgacgccaactatcgcgcgaccgcgatcggtgcgttgcgcgacgtgcaggatgcg
ctcaacgacatcgccgcgcaaaaggagcggatcgtgcgctacgacagcgcggcgcgcgcg
acggacgcggcggcgcggctatcgctgagccgctacgcgcacggttacgtcagctacctg
gaagtcatcgacgccgatcgcgacgcactgaatgcgcggcgccagctgattcacagccgg
caggcgctggccgtcgcgacggtgagcctcgtgcgtgcgctgggcggcgggtggacaccg
tcggcgcgcgccggccggggcgggctgcatgacgcgacgcaagccgacgcgcgatga
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