KEGG   Brucella ceti TE28753-12: V568_100645
Entry
V568_100645       CDS       T02935                                 
Name
(GenBank) hypothetical protein
  KO
K01972  DNA ligase (NAD+) [EC:6.5.1.2]
Organism
bcee  Brucella ceti TE28753-12
Pathway
bcee03030  DNA replication
bcee03410  Base excision repair
bcee03420  Nucleotide excision repair
bcee03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:bcee00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    V568_100645
   03410 Base excision repair
    V568_100645
   03420 Nucleotide excision repair
    V568_100645
   03430 Mismatch repair
    V568_100645
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bcee03032]
    V568_100645
   03400 DNA repair and recombination proteins [BR:bcee03400]
    V568_100645
Enzymes [BR:bcee01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.2  DNA ligase (NAD+)
     V568_100645
DNA replication proteins [BR:bcee03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     V568_100645
DNA repair and recombination proteins [BR:bcee03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA ligase
     V568_100645
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     V568_100645
   MMR (mismatch excision repair)
    DNA ligase
     V568_100645
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      V568_100645
SSDB
Motif
Pfam: DNA_ligase_aden OB_DNA_ligase DNA_ligase_ZBD HHH_2
Other DBs
NCBI-ProteinID: AHB01727
LinkDB
Position
1:609864..611753
AA seq 629 aa
MSDISVEKLTELEAAAELERLARAIAHHDELYHAKDRPEISDAAYDALKRRNEAIEAHFP
ALVRDDSPSRRVGAAPALATFAPVVHARPMLSLDNAFSDEDVRDFVGSVYRFLGQLPDDS
IAFTAEPKIDGLSMSIRYENGILVSGATRGDGTTGENVTANIRTIAEIPNRLPAGAPAVV
EVRGEVYMAKSDFLTLNAQMEAEGKQTYVNPRNTAAGSLRQLDAKVTASRKLRFFAYAWG
EMSDMPADTQLGMVEVFRQWGFPVNPLMKRFNSVDGLLAHYRAIGMERPTLDYDIDGVVY
KVDRLDLQTRLGFRSRSPRWAIAHKFPAEQALTILRGIDIQVGRTGALTPVARLEPITVG
GVVVTNATLHNEDYIKGIGQKGEPIREGRDIRIGDSVIVQRAGDVIPQIVDVVLEEGKKR
GEPYQFPHVCPACGSHAVREEGEAVRRCTGGLICPAQAVERIRHFVSRNAFDIEGLGEKQ
VEFFFNAEDPALCIRSPADIFTLKKRQENSLTKLQNIEGFGATSMKKLYDAIDARREIAL
HRFLFGLGIRYVGEVNAKRLARAYLSYAAFEKAALEAVPPKEGDRTDKGSEAWQDMLAVE
GIGSIVAEAWSIFMASRITAKCWPHFLPK
NT seq 1890 nt   +upstreamnt  +downstreamnt
atgtccgatatttccgtcgagaaactgaccgaactcgaagctgccgccgaactggaacgg
ctggcgcgcgcgattgctcatcacgacgagctttatcacgccaaggacaggccggaaatt
tccgatgcggcttatgatgcactgaagcggcgcaacgaggcgattgaagcgcactttccg
gcacttgtccgcgatgacagcccgtcgcggcgtgtgggtgcagccccggcgcttgccacc
tttgcgcctgttgttcacgcgcggcccatgctgtcgctggataatgcctttagtgatgag
gacgtgcgtgattttgttggcagcgtctatcgctttctgggccaactgccggatgattcc
atcgcctttaccgcagaaccgaagatcgatgggctttccatgtcgatccgttacgagaat
ggaattctggttagcggtgcgacacgcggggatggcacaacgggcgagaatgtaacagcc
aatatccgcaccattgctgaaatcccgaacaggcttccggcaggtgcgcctgctgtcgtg
gaagtgcgcggcgaggtctatatggccaagagcgactttctgacgctcaatgcgcagatg
gaggcggagggcaagcagacctatgtgaacccgcgcaatacggcagcaggttcgctgcgc
cagcttgatgcgaaggtgacggcaagccgcaagctcaggttcttcgcctatgcctggggg
gaaatgtcggacatgcctgcggatacgcaattgggcatggtcgaggtttttcgccaatgg
ggctttccggtcaatccgctgatgaagcggttcaacagcgtggatgggttgcttgcgcat
tatcgcgccatcggcatggagcgtcccacgctcgattacgatatcgacggtgttgtttac
aaggtggaccggctcgacctgcaaacccggcttggttttcgctcgcgcagcccgcgctgg
gcgattgcgcataaattcccggcggaacaggcgctcaccattttgcgcggcatcgatatt
caggtgggccgcactggcgcgctgacgccggtggcgcggctggagccaatcaccgtcggc
ggtgtggttgtgaccaacgcgacgctgcacaatgaggactatatcaagggcataggtcag
aagggcgagccgatccgggaggggcgcgatatccgcattggcgatagcgtgatcgtgcag
cgcgcgggcgatgtcatcccgcagatcgtggatgtggtgcttgaggaaggcaaaaaacgc
ggcgagccttatcagtttccccatgtctgccccgcctgcggcagccatgccgtgcgcgag
gagggcgaggcggtacgccgctgcaccggcgggctgatctgccctgcgcaggcggtggaa
cgcatccgccattttgtgtcgcgcaatgccttcgacattgaggggcttggcgaaaagcag
gtcgagttcttcttcaatgcggaagatccggccctttgcatccgctcgcctgccgatatt
ttcacactgaaaaagcggcaggaaaactcgctgaccaagcttcagaatatcgaaggcttt
ggcgcaacttccatgaagaagctttatgacgccatcgatgcgcggcgcgagattgcactc
caccgctttctgtttggtcttggcatccgctatgtgggcgaggtgaatgccaagcgcctt
gcccgcgcctatctttcatatgccgcttttgagaaggcggcgctggaggctgtgccgcca
aaagaaggcgaccgcaccgacaagggcagcgaagcgtggcaggacatgctggccgtggag
gggatcggttccatcgtggcggaagcgtggtcgatttttatggcgagccgcataaccgcg
aagtgctggccgcacttcttgccgaagtaa

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