Bifidobacterium choerinum: BcFMB_00575
Help
Entry
BcFMB_00575 CDS
T05748
Name
(GenBank) isoleucine--tRNA ligase
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
bcho
Bifidobacterium choerinum
Pathway
bcho00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
bcho00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
BcFMB_00575
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
bcho01007
]
BcFMB_00575
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bcho03016
]
BcFMB_00575
Enzymes [BR:
bcho01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
BcFMB_00575
Amino acid related enzymes [BR:
bcho01007
]
Aminoacyl-tRNA synthetase
Class I (U)
BcFMB_00575
Transfer RNA biogenesis [BR:
bcho03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
BcFMB_00575
Prokaryotic type
Other AARSs
BcFMB_00575
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
DUF5915
tRNA-synt_1g
tRNA-synt_1e
Motif
Other DBs
NCBI-ProteinID:
ATU19676
UniProt:
A0A2D3D4A0
LinkDB
All DBs
Position
complement(125759..129079)
Genome browser
AA seq
1106 aa
AA seq
DB search
MSETPKHVYPKAASGEQSANVAPNPDFPKLEEDVLQYWDTNDTFQKSIDENPSGENSDNE
FVFFDGPPFANGLPHYGHLLTGYAKDVVPRYQTMKGRRVNRVFGWDTHGLPAELEAQKEL
GIDSVDQIEKMGIDKFNDACRASVLKYVGEWRDYVHRQARWVDFEHGYKTLDIPYMESVM
WAFKTLYDKGLAYKGYRVLPYCPKDQTPLSAHELRMDADVYQDRQDTTVSVALKLRDEDD
AYAVIWTTTPWTLPTNFAVVVGDDIDYVEVAPKEGRFAGKKFYFAKALLGSYNKELGEDY
EIVRELKGRDMVGWRYYPIFPYFAGADATAEDGTPGPNAYQILTADYVDTTEGTGLVHQA
PYGEDDMNTLNAHDIRSVDVLDAACRFTSLCPDYEGLFVFDANLPILRNLRAGDGPLAER
PEAERALLFQEKSYVHSYPHCWRCGTPLIYKPVSSWFVSVTKIKPRLLELNQQINWIPEN
VKDGQFGKWLSNARDWSISRNRFWGSPIPVWVSDDPKYPRVDVYGSLDELKRDFGDYPRD
NDGNINMHRPWIDNLTRPNPDDPTGKSTMHRITDVLDCWFESGSMPFAQFHYPFENKEYF
EHHFPSDFIVEYIGQTRGWFYLLHVMATALFDKPAFKNVICHGIVLGDDGQKMSKHLRNY
PDVNGVFNKYGSDAMRWFLMSSPILRGGNLIVTSEGIRDTVRQIMLPVWSSYYFFTLYAN
AANDGNGYDARRVRPDEVDGLAQMDRYLLARTRQLIADVTRDMDAFAISDACDAVADYID
MLTNWYIRNSRDRFWNEDENAFNTLYTALEAFMRVLAPLAPMEAEAVWRGLTGGESVHLG
DWPYLTDPDTGADTELGRVLQENGALVAAMDKVREIVSATLSLRKANKMRVRQPLAKLTV
VVDEPSQVDVYDALLKSELNIKAIDYLMLDEAAEHGLKIVEELKVNARAAGPRLGKQVQF
AIKASKSGAWHADPKTGDPVIETPDGEITLQGDEYDITRRVEEADASERANSASSILPSG
GFVILDLALDDALIAEGYARDVIRAVQDARKAAGLDVTDRIDLTLSVPQDDIAKVERFED
LIKSETLAVSLTLQPGETLKADVSKA
NT seq
3321 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgaaacaccaaagcacgtgtaccctaaggcagcatccggcgaacagagcgccaac
gtggcgccgaacccggatttccccaagctcgaagaggatgtgctgcagtactgggatacg
aacgacaccttccagaaatccatcgatgagaatccctccggcgagaacagcgacaatgaa
ttcgtgttcttcgacggtccgcccttcgcgaacggcctgccgcactacggccatctgctg
accggctacgcgaaggatgtcgtgccgcgttatcagacgatgaaggggcgccgggtcaac
cgcgtcttcggctgggacacgcacggcctgcccgccgaactcgaggcgcagaaggagctc
ggcatcgattcggtcgatcagatcgagaagatgggcatcgacaagttcaacgacgcctgc
cgcgcctccgtgctcaaatacgtgggcgaatggcgcgactatgtgcaccgccaggcgcgt
tgggtcgacttcgagcacggctacaagacgcttgacatcccgtatatggagtcggtgatg
tgggcgttcaagacgctctacgacaagggattggcctacaagggctaccgtgtgctgccg
tactgcccgaaggatcagacgccgctttcggcgcacgagctgcgtatggatgccgacgtc
tatcaggaccgtcaggacacgaccgtctcggtcgcgctcaagctgcgcgacgaggacgac
gcctacgccgtcatctggacgacgacgccgtggacgctgccgaccaatttcgccgtcgtc
gtcggcgacgacatcgactacgtcgaggtcgccccgaaggaaggtcgattcgccggcaag
aagttctacttcgcgaaggcgctgctcggctcctacaacaaggagctcggcgaggactac
gagatcgtgcgcgagctcaagggccgcgacatggtcggctggcgctactatccgatcttc
ccgtacttcgccggcgccgacgcgacggccgaggacggcacgccgggtccgaacgcgtac
cagatcctcaccgccgactacgtcgacacgaccgaaggcaccggcctcgtgcatcaggcg
ccctacggcgaggacgatatgaacacgctcaacgcgcacgacatcaggagcgtcgacgtg
ctcgacgccgcatgccgcttcacgtcgctgtgcccggactatgaaggcctgttcgtattc
gacgcgaatctgccgatcctgcgcaacctgcgtgccggcgacggtccgctcgccgagcgt
cccgaggccgaacgcgcgctgctgttccaggagaagagctacgtgcattcgtacccgcac
tgctggcgctgcggcacgccgctgatctacaagccggtctcgagctggttcgtctcggtc
acgaagatcaagccgcgtctgctcgaactcaaccagcagatcaactggattccggagaac
gtcaaggacggccagttcggcaagtggctgtcgaacgcacgcgactggtcgatctcgcgc
aatcgcttctggggctcgccgatcccggtgtgggtgagcgacgacccgaagtacccgcgc
gtcgacgtctacggttcgctcgacgaactcaagcgcgacttcggcgactatccgcgcgac
aacgacggcaacatcaacatgcaccgtccgtggatcgacaacctgacgcgtccgaatccg
gacgatccgaccggcaagtcgacgatgcaccgcatcaccgatgtgctcgactgctggttc
gagtccggttcgatgccgttcgcgcagttccattacccctttgagaacaaggagtacttc
gagcaccacttcccgtccgatttcatcgtcgagtacatcggccagacgcgcggatggttc
tatctgctgcatgtcatggcgactgcgctgttcgacaagccggcgttcaagaacgtcatc
tgccatggcatcgtgctcggtgacgacggccagaagatgagcaagcacctgcgcaactat
ccggacgtcaacggcgtgttcaataagtatggctccgacgcgatgcgctggttcctgatg
agttcgccgatcctgcgcggcggcaacctcatcgtgacctccgagggcatccgcgacacg
gtccgtcagatcatgctgccggtgtggagctcgtactacttcttcacgctgtatgcgaac
gccgcgaacgacggcaacggctacgacgcgcgccgcgtgcgccccgacgaggtcgacggc
ctcgcgcagatggaccgctacctgctcgcccgcacgcgtcagctcatcgccgacgtgacc
cgcgacatggacgccttcgcgatctccgacgcatgcgacgcggtcgccgactacatcgac
atgctgacgaactggtacatccgcaactcgcgcgaccgcttctggaacgaggacgagaac
gcgttcaacacgctgtacacggcgctcgaggcgttcatgcgcgtgctcgcgccgctcgcc
ccgatggaggccgaggccgtgtggcgcggcctgaccggcggcgaatcggtgcatctgggc
gactggccgtatctgaccgatcccgacaccggcgccgacaccgagctgggacgggtgctc
caggagaacggcgcgctcgtcgccgcgatggacaaggtgcgcgagatcgtctcggcgacg
ctgtcgctgcgcaaggccaacaagatgcgcgtgcgccagccgcttgcgaagctgaccgtt
gtcgtcgatgaaccgtcgcaggtcgacgtctacgacgcgctgctcaagagcgagctcaac
atcaaggcgatcgactacctgatgctcgacgaggcggccgaacacggcctcaagatcgtc
gaggagctcaaagtcaacgcgcgcgccgccggcccgcgtctaggcaagcaggtgcagttc
gcaatcaaggcgtcgaagagcggcgcatggcatgccgatccgaagaccggcgacccggtc
atcgagacgccggacggtgagatcacgctgcagggcgacgaatacgacatcacgcgccgc
gtcgaggaggcggacgcgtccgaacgcgccaactcggcgtcgtcgatcctgccgtcgggc
ggattcgtcatcctcgacctcgcgctcgacgacgcgctcatcgctgaaggctacgcgcgc
gacgtcatccgcgccgtgcaggacgcgcgcaaggccgccggactcgacgtgaccgaccgc
atcgacctgacgctgagcgtgccgcaggacgacatcgcgaaggtcgagcgcttcgaggac
ctcatcaagtccgagacgctcgccgtgtcgctgacgctccagccgggcgagacgctcaag
gccgacgtcagcaaggcctga
DBGET
integrated database retrieval system
