KEGG   Bifidobacterium choerinum: BcFMB_00650
Entry
BcFMB_00650       CDS       T05748                                 
Name
(GenBank) type I-E CRISPR-associated protein Cas5/CasD
  KO
K19125  CRISPR system Cascade subunit CasD
Organism
bcho  Bifidobacterium choerinum
Brite
KEGG Orthology (KO) [BR:bcho00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:bcho02048]
    BcFMB_00650
Prokaryotic defense system [BR:bcho02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Subtype I-E factors
    BcFMB_00650
SSDB
Motif
Pfam: Cas_Cas5d
Other DBs
NCBI-ProteinID: ATU19689
UniProt: A0A2D3D3G8
LinkDB
Position
complement(149157..149900)
AA seq 247 aa
MGSGVLMLRLAGPMQSWGDASRFNRRETRTEPTKSAIIGLLASAEGRTREDPIEDLLQLS
FGVRVEQQGLVMRDYQTEKSIERKRNSTSFAKVLPVTNRYYLSDAMFLVVIGAPRATLET
LDDALRHPRWPLYLGRRSCPPAYPFNLGIHEEYEGIEDALEHHPWQAASWYRRSHPGERL
EIVRDAVGDESGEVQNDLPVSFSQRHREYSGRAVHRYYIANPSDKRHDEATDAATDAAAD
HDPMFFA
NT seq 744 nt   +upstreamnt  +downstreamnt
atgggttccggagtgttgatgctccgtctcgccgggccgatgcagtcgtggggcgacgcc
tcacggttcaatcggcgcgaaacgaggacggagccgacgaaaagtgcgataatcggtctg
ctcgcaagcgccgagggacggacgcgggaggatccgatcgaggatctgctccagctgtcc
ttcggcgtgcgcgtcgagcagcagggtctcgtcatgcgggactaccagaccgagaaatcc
atcgaacgcaaacgcaactcgacgagtttcgcgaaggtgctgccggtgacgaaccggtac
tatctgtccgacgcgatgttcctcgtggtcatcggcgcgccgcgcgccacgttggagacg
ctcgacgacgcgctgcggcatccacgttggccgctgtatctcggacggcgctcgtgcccg
cccgcatacccgttcaacctcggcatccacgaggagtacgaaggtatcgaggacgcgctt
gagcaccatccttggcaggccgcgtcctggtatcgccgcagtcatcccggcgaacggctg
gagatcgtgcgcgatgccgtcggtgacgaatccggcgaggtgcagaacgacctgccggtg
tccttcagccagcggcatcgggaatatagcgggcgtgccgtgcatcggtactacatcgcc
aatccgagtgacaagcggcatgacgaagccacggacgcagcaactgacgcagccgctgac
cacgacccgatgttcttcgcatag

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