KEGG   Bifidobacterium choerinum: BcFMB_01505
Entry
BcFMB_01505       CDS       T05748                                 
Name
(GenBank) endonuclease III
  KO
K10773  endonuclease III [EC:3.2.2.- 4.2.99.18]
Organism
bcho  Bifidobacterium choerinum
Pathway
bcho03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:bcho00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    BcFMB_01505
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bcho03400]
    BcFMB_01505
Enzymes [BR:bcho01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     BcFMB_01505
DNA repair and recombination proteins [BR:bcho03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     BcFMB_01505
 Prokaryotic type
     BcFMB_01505
SSDB
Motif
Pfam: HhH-GPD HHH RecR_HhH EndIII_4Fe-2S PSI HHH_5
Other DBs
NCBI-ProteinID: ATU19831
UniProt: A0A2D3D2Z5
LinkDB
Position
388842..389672
AA seq 276 aa
MAAKRESKRARVTRMHREYDRLREFIPVTKCQLDYRTPFELIVATVLSAQTTDRRVNGVT
PELFSCYPNADALAKANISDVESIIRTLGFYRMKSKHIIELAQALATRFGGVVPHTMAEL
TSLPGVGRKTANVVLGNAFHIPGFPVDTHVIRVTGRLGWRDADEIAPEDIEHDVTAAFPP
EEWTDLSHRLIIFGRTLCTARAPQCAWCPLADSCPSAGDFLDLPSARTGTRHPAKRAAAT
RRTAASAKTGKTATAKKTTSKSTTAAKRSTSASASR
NT seq 831 nt   +upstreamnt  +downstreamnt
atggccgcgaaacgggaatcgaagcgggcgcgcgtcacacgcatgcaccgcgaatacgat
cggctgcgcgaattcatcccggtcacgaaatgccagctcgactaccgcacgcccttcgaa
ctgatcgtcgcaacggtgctcagcgcgcagacgaccgaccggcgcgtcaacggcgtcacg
cccgagctgttctcctgctatccgaacgccgacgcgctcgcgaaggcgaacatcagcgac
gtcgagtcgatcatccgcacgctcggcttctaccggatgaaaagcaagcacatcatcgag
ctcgcgcaggcgctcgcgacgcgcttcggcggcgtcgtgccgcatacgatggcggagctg
acgtcgctgcccggcgtcggacgcaagacggcgaacgtcgtgctcggcaacgcgttccac
attccgggattcccggtggacacgcatgtcatccgcgtcaccgggcgcctcggctggcgc
gacgccgacgagatcgcccccgaggacatcgaacacgacgtgacggccgcgttcccgccc
gaggagtggaccgacctgtcgcaccgcctcatcatcttcggccgcacattgtgcacggcg
cgcgcgccgcagtgcgcatggtgcccgctggccgactcgtgcccgagcgccggcgatttc
ctcgacctgccgtcggcgcgcaccggcacgcgccacccggcgaagcgcgcggcggcgacg
cgcaggacggcggcatcggcgaagacagggaaaacggcgacggcgaagaaaacgacgtcg
aaatcgacgacggcggcgaagcgatcgacatcggcatcggcgtcccggtag

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