Bifidobacterium choerinum: BcFMB_08900
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Entry
BcFMB_08900 CDS
T05748
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
bcho
Bifidobacterium choerinum
Pathway
bcho00300
Lysine biosynthesis
bcho00550
Peptidoglycan biosynthesis
bcho01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
bcho00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
BcFMB_08900
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
BcFMB_08900
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
bcho01011
]
BcFMB_08900
Enzymes [BR:
bcho01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
BcFMB_08900
Peptidoglycan biosynthesis and degradation proteins [BR:
bcho01011
]
Precursor biosynthesis
Amino acid ligase
BcFMB_08900
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Motif
Other DBs
NCBI-ProteinID:
ATU21017
UniProt:
A0A2D3D790
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All DBs
Position
2176319..2177848
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AA seq
509 aa
AA seq
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MTLTLQSAAALLGEHDLLREIITPDRWTDFASTIPDSDVPFAHITYDSKQIEPHTLMCCK
GNFKAEYLDGADGRGMAAYVAEHDYSGVTRAPGLIVDDASKALSLLSQAFYDYPERELKL
IGVTGTKGKTTTSYFTHAIINAMSGNECALFSSVDNCVDGVHYVESDLTTPESLDAARMM
REAVDNGMRYLVMEVSSQAYKVNRVYGLTFDAAAFLNISPDHISPIEHPSFEDYLHCKRQ
IVRNTHALVLGVPGDYANLVAEDATIANVPVTTFSIDEATADVTAQPIDDTHTTFLFTQG
QPIGELSLALEGDFNYANACAALALAQIVGIDIHDPRALQSMADVRIAGRMEETRDPQSD
TVAIVDYAHNYASVNALLDFVERKYGARRPRITLLTGSAGDKALDRRREIIEAAQDRVQR
IMLTTEDTNTEDPMAIAEEMLGYVTNPDVDASIIIDRAGAVEDVVAEAREHDGFDVLLLI
GKGDERWIKMHNRHVPYEGDSSIIRRLFS
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgacgctgacattgcaatccgcagccgcactgctgggcgagcacgatctgctgcgggag
atcatcacaccggaccgctggaccgactttgcgtccacgatccccgattccgacgtcccc
ttcgcgcacatcacctacgactccaagcagatcgagccgcacacgctcatgtgctgcaag
ggcaacttcaaggccgaatacctcgacggcgccgacgggcgcggcatggccgcctacgtc
gccgaacacgactacagcggcgtcacgcgcgcccccggcctcatcgtcgacgacgcgagc
aaggcgctcagcctgctctcccaggccttctacgactatccggaacgcgagctcaagctc
atcggcgtcaccggaacgaagggcaagacgacgacctcatacttcacgcacgcgatcatc
aacgcgatgagcggcaacgagtgcgcgctgttctcctcggtcgacaactgcgtcgacggc
gtccactacgtcgaatccgacctgacgacgcccgaatcgctcgacgcggcgcgcatgatg
cgcgaggccgtcgacaacggcatgcgctacctcgtcatggaggtctcctcgcaggcgtac
aaggtcaaccgcgtctacggcctgaccttcgacgcggccgcgttcctcaacatctccccc
gaccacatcagcccgatcgaacacccctccttcgaagactacctgcactgcaagcgccag
atcgtgcgcaacacgcacgcgctcgtgctcggcgtgcccggcgactacgcgaatctcgtc
gccgaggacgcgacgatcgcgaacgttccggtcacgaccttctcgatcgacgaggcgacc
gccgacgttaccgcgcagccgatcgacgacacgcacacgaccttcctgttcacgcagggc
cagccgatcggcgagctgagcctcgcgctcgaaggcgacttcaactacgcgaacgcctgc
gcggcgctcgcgctcgcgcagatcgtcggcatcgacatccacgatccgcgcgcgttgcag
tcgatggccgacgtgcgcatcgccggcaggatggaggagacgcgcgatccgcagtcggac
acggtcgccatcgtcgactacgcgcacaactacgcctccgtcaacgcgctgctcgacttc
gtcgaacgcaagtacggcgcgcggcgtccgcggatcaccttgctcaccgggtcggcggga
gacaaggcgctcgaccgccgccgggagatcatcgaggccgcgcaggaccgcgtgcagcgc
atcatgctcacgaccgaggacacgaacaccgaagatccgatggcgatcgccgaggagatg
ctcggctacgtgacgaatccggacgtcgacgcgtcgatcatcatcgaccgcgcgggcgcc
gtcgaggacgtcgtcgccgaagcgcgagagcatgacggcttcgacgtgctgctgctgatc
ggcaagggcgacgaacgctggatcaagatgcacaacaggcatgtgccgtacgagggcgac
tcgagcatcatcaggcgtctgttcagctga
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