Heyndrickxia coagulans 2-6: BCO26_1257
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Entry
BCO26_1257 CDS
T01527
Symbol
yodJ
Name
(GenBank) peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin
KO
K07260
zinc D-Ala-D-Ala carboxypeptidase [EC:
3.4.17.14
]
Organism
bck
Heyndrickxia coagulans 2-6
Pathway
bck00550
Peptidoglycan biosynthesis
bck01100
Metabolic pathways
bck01502
Vancomycin resistance
bck02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
bck00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
BCO26_1257 (yodJ)
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BCO26_1257 (yodJ)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
BCO26_1257 (yodJ)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
bck01002
]
BCO26_1257 (yodJ)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
bck01011
]
BCO26_1257 (yodJ)
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
bck01504
]
BCO26_1257 (yodJ)
Enzymes [BR:
bck01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.17 Metallocarboxypeptidases
3.4.17.14 zinc D-Ala-D-Ala carboxypeptidase
BCO26_1257 (yodJ)
Peptidases and inhibitors [BR:
bck01002
]
Metallo peptidases
Family M15: zinc D-Ala-D-Ala carboxypeptidase family
BCO26_1257 (yodJ)
Peptidoglycan biosynthesis and degradation proteins [BR:
bck01011
]
Peptidoglycan biosynthesis and degradation
Carboxypeptidase
BCO26_1257 (yodJ)
Antimicrobial resistance genes [BR:
bck01504
]
Gene sets
Vancomycin resistance modules
Vancomycin resistance, D-Ala-D-Lac type [MD:
M00651
]
BCO26_1257 (yodJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VanY
Peptidase_M15_4
LPAM_1
Motif
Other DBs
NCBI-ProteinID:
AEH53316
LinkDB
All DBs
Position
1309263..1310057
Genome browser
AA seq
264 aa
AA seq
DB search
MRKYVYTGLAAIFLAGCSVTNGNEPETGAHKSTAPAKPAHTDTAKKTGSGLVLDAKYFNK
IKTVNGKKVIQNPDNILALVNKTYILGDYKPKDLVRPNVRFSFGDERIEKSYMRKEAAAA
LEKMFAAAEKDGIELYAASAYRSYNRQKAVYAAEVKSSGEEHAEQAVAIPGSSEHQTGLA
VDITSQTAHFLLTQQMGEQKEGIWLAKHAHEYGFILRYPKNKENITKYEYEPWHFRYVGK
KAAAAIYKHGWTLEEYFEHVHKAE
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atgagaaaatatgtatataccggccttgccgcgatttttttggccggctgcagtgtaaca
aacggaaacgagccggaaacgggcgcccataaaagtaccgcgccggcgaaaccggcccac
acggataccgcgaaaaaaaccggttccggtttggtgcttgatgcaaaatattttaacaaa
atcaaaacggttaacgggaaaaaagtgatccagaatccggacaatattttggcacttgtc
aataaaacctatattctcggggattacaaaccgaaagacctcgtccggccgaatgtccgc
ttttcatttggcgacgaaagaatcgaaaaaagctatatgcggaaagaagctgccgcggcg
cttgaaaaaatgtttgccgccgccgaaaaggacggcattgaattatatgccgcttccgca
taccggtcgtacaaccgccagaaagccgtatatgcggcagaagtgaaaagttcgggggaa
gaacatgcagaacaggcggttgccatcccggggtcgagcgaacatcagaccggtcttgcc
gtcgacatcacaagccagaccgcccattttctcctcacacagcaaatgggggagcagaag
gaaggcatctggcttgcaaaacacgcgcatgaatacgggtttattttaaggtatccgaaa
aacaaagagaacattacgaaatatgagtacgagccctggcatttccggtatgtcggaaaa
aaggcggcagctgccatttacaagcacggctggacgcttgaagagtatttcgaacatgta
cataaggctgaataa
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