Shouchella clausii: ABC2888
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Entry
ABC2888 CDS
T00228
Symbol
patB
Name
(GenBank) aminotransferase
KO
K14155
cysteine-S-conjugate beta-lyase [EC:
4.4.1.13
]
Organism
bcl
Shouchella clausii
Pathway
bcl00270
Cysteine and methionine metabolism
bcl00450
Selenocompound metabolism
bcl01100
Metabolic pathways
bcl01110
Biosynthesis of secondary metabolites
bcl01230
Biosynthesis of amino acids
Module
bcl_M00017
Methionine biosynthesis, aspartate => homoserine => methionine
Brite
KEGG Orthology (KO) [BR:
bcl00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
ABC2888 (patB)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
ABC2888 (patB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
bcl01007
]
ABC2888 (patB)
Enzymes [BR:
bcl01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.13 cysteine-S-conjugate beta-lyase
ABC2888 (patB)
Amino acid related enzymes [BR:
bcl01007
]
Aminotransferase (transaminase)
Class II
ABC2888 (patB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
Cys_Met_Meta_PP
Aminotran_3
NIR_SIR_ferr
Motif
Other DBs
NCBI-ProteinID:
BAD65422
UniProt:
Q5WDY8
LinkDB
All DBs
Position
complement(3016633..3017763)
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AA seq
376 aa
AA seq
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MKWDGTKARFGEDDLLPMWVADMDFKAPTAVIDALKAKVEHGVYGYAAPSIEADEAIVNW
VDSQYGWKIEADSIVHVTGVVPALSNLIKTFTNEGDGIIIQPPVYYPFYDVIEKNKRQLV
KNPLLFDGNHYKMDLAGLEQVITDKTKMLLLCHPHNPGGRVWSKEELQALAEICERHNLY
VISDEIHADLLFEGYTHTPFATVTETIANRTFTALAPTKTFNLAGVQGAYVIIEDPKLRL
EFRRELAATFMNGSNMFSDIATKAAYEHGKPWLKELMAYIQANYQYAADYLATYMPKIKP
IQPQGTYLLWLNCQELGLHPDERKKWLLQEAKVALNHGAIFGEEGRDFERLNLATPRETL
TEGLERIRRAYENRGF
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgaaatgggatggaacaaaagcacggtttggcgaagatgatttgttgccaatgtgggta
gcagatatggattttaaagcgccgaccgctgttattgatgctttaaaggctaaagtggaa
catggcgtttatggctatgcggccccttccattgaggcagacgaagcgattgtgaattgg
gtcgactcccagtatggttggaaaatagaagccgactccatcgtccatgtaacaggcgtt
gtgccggcattaagcaatttaattaaaacctttacaaatgaaggcgacggaatcattatt
caaccacctgtatattacccgttttatgatgtgattgaaaaaaacaaacggcaacttgtg
aaaaatccgcttctatttgacggaaaccactataaaatggatttagctgggttagagcag
gtgatcacagacaaaacaaaaatgcttctgttgtgccacccgcataatccaggcggacgc
gtgtggagcaaagaagagttgcaagcgctggccgagatatgtgagcgtcacaacctttat
gtcatttctgatgaaatccatgccgatttgctttttgaaggctatacacacacaccgttt
gcaactgtgacagaaacaattgcaaaccgtacgtttacagcgcttgcgccaacgaaaaca
tttaatctcgctggcgttcaaggagcttacgtaattattgaagatccgaagcttcgcctg
gaattccgtagagagctggctgcgacatttatgaatggaagcaatatgttctctgacatt
gctactaaagcggcatacgagcacggaaagccttggttaaaggaattaatggcatacatc
caagctaattatcagtatgctgccgactatttggccacttatatgccaaaaatcaagccg
atccaaccacaaggaacgtacttattatggctaaattgccaagagcttggccttcaccct
gatgaacggaaaaaatggttgctgcaagaagcgaaagttgcacttaaccatggtgccatt
ttcggggaagagggccgtgatttcgagcgtttgaatttggcaactcctcgagaaacgctt
acggaagggttggagcgcatccgccgcgcttatgaaaatagaggtttttga
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