KEGG   Bucephala clangula (common goldeneye): 308442188
Entry
308442188         CDS       T11949                                 
Symbol
RBX1
Name
(RefSeq) E3 ubiquitin-protein ligase RBX1 isoform 1
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
bcla  Bucephala clangula (common goldeneye)
Pathway
bcla03420  Nucleotide excision repair
bcla04110  Cell cycle
bcla04114  Oocyte meiosis
bcla04120  Ubiquitin mediated proteolysis
bcla04141  Protein processing in endoplasmic reticulum
bcla04310  Wnt signaling pathway
bcla04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:bcla00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    308442188 (RBX1)
   04120 Ubiquitin mediated proteolysis
    308442188 (RBX1)
  09124 Replication and repair
   03420 Nucleotide excision repair
    308442188 (RBX1)
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    308442188 (RBX1)
   04350 TGF-beta signaling pathway
    308442188 (RBX1)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    308442188 (RBX1)
   04114 Oocyte meiosis
    308442188 (RBX1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:bcla04121]
    308442188 (RBX1)
   03400 DNA repair and recombination proteins [BR:bcla03400]
    308442188 (RBX1)
Enzymes [BR:bcla01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     308442188 (RBX1)
Ubiquitin system [BR:bcla04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   308442188 (RBX1)
  Multi subunit type E3
   SCF complex
    Ring finger protein
     308442188 (RBX1)
   Cul2 complex
     308442188 (RBX1)
   Cul3 complex
     308442188 (RBX1)
   Cul4 complex
     308442188 (RBX1)
   Cul7 complex
     308442188 (RBX1)
   Cul8 complex
     308442188 (RBX1)
   Cul9 complex
     308442188 (RBX1)
DNA repair and recombination proteins [BR:bcla03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      308442188 (RBX1)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      308442188 (RBX1)
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4 zf-C3HC4_2 zf-RING_11 DUF8003
Other DBs
NCBI-GeneID: 308442188
NCBI-ProteinID: XP_080801809
LinkDB
Position
4:55509347..>55519672
AA seq 108 aa
MAAAMDVDTPSGTNSGAGKKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQ
ASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQKYGH
NT seq 327 nt   +upstreamnt  +downstreamnt
atggcggccgcgatggacgtggacacccccagcggcaccaacagcggcgcgggcaagaag
cgcttcgaagtgaagaaatggaatgcagtagctctctgggcatgggacattgtggttgac
aactgtgccatttgcagaaaccatattatggatctatgcatagaatgtcaagcaaaccaa
gcatcagctacctctgaagagtgcacagttgcatggggcgtctgcaatcatgctttccac
ttccactgcatctctcgctggctcaaaactcgccaagtatgtccgctggacaacagggaa
tgggaattccaaaagtacggacactag

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