Bucephala clangula (common goldeneye): 308445309
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Entry
308445309 CDS
T11949
Symbol
RAPGEF4
Name
(RefSeq) rap guanine nucleotide exchange factor 4
KO
K04351
Rap guanine nucleotide exchange factor 4
Organism
bcla Bucephala clangula (common goldeneye)
Pathway
bcla04081
Hormone signaling
bcla04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
bcla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
308445309 (RAPGEF4)
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
308445309 (RAPGEF4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bcla04131
]
308445309 (RAPGEF4)
Membrane trafficking [BR:
bcla04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
308445309 (RAPGEF4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RasGEF
cNMP_binding
RasGEF_N
RA_2
RA
Motif
Other DBs
NCBI-GeneID:
308445309
NCBI-ProteinID:
XP_080807488
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All DBs
Position
8:complement(<18416824..>18569483)
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AA seq
1018 aa
AA seq
DB search
MVAAHTSHSASSGEWIACLDKRPLERSSEDVDIIFTRLKEVKAFEKFHPNLLQQICLCGY
YENLEKGITLFRQGDIGTNWYAVLTGSLDVKVSDTSNHQDAVTICTLGIGTAFGESILDN
TPRHATIVTREYSELLRIEQKDFKALWEKYRQYMSGLLTPPYGVMETGSNNDRMPDKDSM
SSSSLCQVSKNCNKTPLIEPHIPHRPTKTITQVPSEKILRAGKILRNAILSRAPHMIRDR
KYHLKTYRKYYDRILCSDQWASPTSTFGHSPELEACCCLPLVDQEHYFQDKYLFYRFLDD
EREDAPLPTEEEKKECDEELQDTMLFLSQIGPDAHMRMILRKPPGQRTIDDLEIIYEELL
HIKALSHLSTTVKRELAGVLIFESHPKAGTVLFNQGEEGTSWYIILKGSVNVVIYGKGVV
CTLHEGDDFGKLALVNDAPRAASIVLREDNCHFLRVDKEDFNRILRDVEANTVRLKEHDQ
DVLVLEKIPAGNRVSNQGNSQPQHKYIVMSGTPEKILEHFLETMRLEVTLNEATDSALND
FIMMHCVFMPNSQLCPALMAQYPFPSQGTEQEKMDYALNNKRRVIRLVLQWAALYGDLLQ
EDEAAMAFLEEFYVSVSDDTRMIAALKEQLPELEKIVKQVSEEPKAPQKKHKVLLQLFNT
SDDRAQKRQPIRGSDEVLFKVYCIDQTYTTIRVPVSSSVKEVISAVADKLGSGEGLIIVK
MSSGGEKVVLKPHDVSVFTTLSVNGRLFACPRDQFDSLAPLPEQEGPSTGTVGTFELMSS
KDLAHQMTIYDWELFNCVHELELIYHTFGRHNFKKTTANLDLFLRRFNEIQFWVVTEICL
CSQLSKRVQLLKKYIKIAAHCKEYKNLNSFFAIIMGLSNVAVSRLSLTWEKLPSKFKKIY
AEFESLMDPSRNHRAYRLTVAKLDPPIIPFMPLLIKDMTFTHEGNKTLTDNLVNFEKMRM
IANTVRTVKFCRSQSFNPDAALTNKNHQDVRSYVRQLNVIDNQRTLSQMSHRLEPRRA
NT seq
3057 nt
NT seq
+upstream
nt +downstream
nt
atggtggccgcgcacacctcccattccgcctcctccggcgagtggatcgcttgcctggat
aaaagacctttggaacgttccagtgaagatgtagatataatattcacacgactgaaagaa
gtgaaggcttttgagaaatttcatccaaaccttctccagcagatatgtctctgtggatat
tacgaaaatctggaaaagggaatcacattatttcgtcagggtgatattggaacaaactgg
tatgctgttctgacaggatccctcgatgtgaaggtttctgatacaagcaaccaccaggat
gctgtaacaatatgcactttgggaataggaactgcctttggagagtccattctggataac
actcctcgccatgctaccattgttaccagagaatacagcgagctccttcgaattgagcag
aaggacttcaaagcactttgggagaaatatcgacagtatatgtctggacttctcactcct
ccttatggtgttatggaaacaggctccaacaatgacagaatgccagataaggacagtatg
tcaagcagctctctttgccaagtctctaaaaactgtaataagacacctcttattgaacct
cacatcccacatcgtcctactaaaaccattacacaggttccttcagaaaagatcctcaga
gctggaaagattttgcggaatgcaattctgtcccgagcacctcacatgataagagatcgt
aaatatcatctgaagacgtacaggaagtattatgacagaattttatgtagtgaccaatgg
gcttctcccaccagcacctttgggcactctccagaacttgaggcctgctgctgtttacct
ctggtggatcaggaacactactttcaggacaaatacttattttaccgatttttggatgat
gagcgtgaagatgcccctttgccaactgaggaagagaaaaaggagtgtgatgaggagcta
caggacactatgcttttcctgtctcagattggtccagatgctcatatgaggatgattctc
agaaaaccgcctggccagagaactatagatgatttagaaattatatatgaagaacttctt
cacattaaagccttatctcatctttctaccacagtaaagcgagaattagcaggtgtcctc
atttttgagtcacatcccaaagcaggaacggtcttatttaatcagggagaagaaggtact
tcttggtacattatcctgaagggatcagtaaacgtagtcatttatggcaagggtgtggta
tgtactctacacgaaggagatgattttggcaagctagcacttgtgaatgatgctcctaga
gctgcatctattgttctgcgtgaagacaactgccacttcttgagagtagacaaggaggat
ttcaacagaatccttagggacgtggaagcaaacactgtaaggctcaaagaacatgaccaa
gatgtcttggtgttggagaagatcccagcaggaaatagagtttctaatcaaggaaattca
cagcctcaacacaagtatattgtgatgtcaggaaccccagaaaaaattttagagcacttt
ctagaaactatgcgccttgaagtaactttaaatgaagcaacagattctgctttaaatgac
tttataatgatgcactgtgtttttatgccaaatagtcagctctgcccagccttgatggca
caatatccttttccttcccagggtacagagcaagagaaaatggattatgccctcaacaac
aaaaggcgagtcattcgactggttctccagtgggctgctttatatggagatctactgcaa
gaagatgaagcagcaatggcctttttggaggaattttatgtatctgtatcagatgatact
agaatgattgcagccctaaaggaacaacttccagagctagagaaaattgtaaaacaagtt
tctgaagaacctaaagcaccacaaaagaagcacaaagttcttctgcagctgtttaacaca
agtgatgacagagcacagaaacgccagcctattaggggcagtgatgaagttctttttaaa
gtgtactgcatagaccaaacttataccacaatccgtgtaccagtgtcttcatccgtgaag
gaagtgatcagcgcagtagcagataagctgggttctggagaaggcctcatcatagtaaag
atgagttcaggaggagaaaaagtggtgctcaagcctcatgatgtttcagtgtttacaact
ctcagtgttaatggacggctgtttgcttgcccacgtgatcagttcgattcactggcgcca
ttaccagaacaagagggaccatctactggtacagtaggaacgtttgaactgatgagttcc
aaagacttagctcatcagatgacaatttatgactgggagctcttcaactgtgtgcatgag
ctggaactgatctatcacacttttggaaggcacaattttaaaaagaccacagcaaatctg
gacttgtttttaagaagatttaatgaaattcagttctgggtggtcactgagatttgtctt
tgctctcaactcagcaagcgtgtgcagctattaaagaagtatattaagatagcagcccac
tgtaaagaatacaaaaatctgaattccttttttgctattattatgggactgagtaatgtt
gccgtgagccgtctctcattaacgtgggagaaacttccaagcaagttcaagaagatctat
gcagaatttgaaagcttaatggatccatcaagaaaccatagggcctacagactaactgta
gctaaattggaccctccaataattcctttcatgccacttcttataaaagacatgacgttt
actcatgagggaaacaagacactcactgacaatctagtaaactttgaaaaaatgcgcatg
attgccaacactgtcaggacagtgaaattctgccgaagccaatctttcaatcctgacgca
gccctaactaataagaaccatcaggatgttcggagctatgtgcggcaattaaatgtgatt
gacaaccagagaactttatcacagatgtctcaccgactagagccgcgtcgggcataa
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