Bucephala clangula (common goldeneye): 308453048
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Entry
308453048 CDS
T11949
Symbol
SCN4A
Name
(RefSeq) sodium channel protein type 4 subunit alpha
KO
K04837
voltage-gated sodium channel type IV alpha
Organism
bcla Bucephala clangula (common goldeneye)
Brite
KEGG Orthology (KO) [BR:
bcla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
bcla04040
]
308453048 (SCN4A)
Ion channels [BR:
bcla04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
308453048 (SCN4A)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
IQ
GPHH
HpsJ
Motif
Other DBs
NCBI-GeneID:
308453048
NCBI-ProteinID:
XP_080821008
LinkDB
All DBs
Position
27:830690..865876
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AA seq
1843 aa
AA seq
DB search
MAGLPHIPGPENLRPFTPESLAAIEQRIAEAEALKIKRQQVELPEEEELKPSSDLEAGKN
LPLIYGDPPVELIGTPLEDLDPFYKDKKTFIVLNKGKSIFRFSATPALYLLGPFHPIRRG
AIKVLIHSCFKLFSMFIMITILTNCVFMTLSNPPAWSKNVEYTFTGIYTFESLIKILSRG
FCIDDFTFLRDPWNWLDFMVISMAYITEFVDLGNISALRTFRVLRALKTITVIPGLKTIV
GALIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRHKCVRWPPLNDTLLGDFGLDNNT
LANATLYSNFTDSIDSNFTSNSTFDFEAYINDEANFYFLEGALDALLCGNSSDAGKCPEG
YECMKAGRNPNYGYTSYDTFSWAFLALFRLMTQDFWENLFQLTLRAAGKTYMIFFVVVIF
LGSFYLINLILAVVAMAYAEQNDATMLEAQQKEEEFQQLMEQLKKHQEEQEKQLQNRRSS
SGSLRSSTAEKKSDSDLNSDQDKVKDCNGRVVPKVVLERSATVIEFNPGNETEKSDYNHL
TVGNQDGPGLEKRVGSAISVISNAVEELEEAHQKCPPWWYKFAHTFLIWDCCLPWLKLKE
FVKLVVMDPFVDLGITICIVLNTLFMAMEHYPMTEEFENVLTVGNLVFTGIFTAEMVLKL
IALDPYEYFQQGWNIFDSIIVTLSLVELGLANVQGLSVLRSFRLLRVFKLAKSWPTLNML
IKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYMECVCKISLDCTLPRWHMHDFFH
SFLIVFRILCGEWIETMWDCMEVAGQTMCLIVFMMVMVIGNLVVLNLFLALLLSSFSADS
LAASDDDGEMNNLQIAIGRITRGIDFVKSSVLMLLRRLWKGKKVAPEEEQEPSKGDNSAL
NHVDTGQEPKSEYMDGVTGKEYLFMDELDHMNFINNPNLTVQVPIASEESDLYEEETSTQ
SDTEDATVRKNPLSSDNASSLCSTVDYKPPLPEEEAVAEEAEDSNEPEECFTEACVKRFP
CLYVDITSERGKVWWNIRKTCFRIVEHDWFETFIVFMILLSSGALAFEDIYIEQRRVIRT
ILEYADKVFSYVFILEMLLKWVAYGFKVYFTNAWCWLDFLIVDVSIVSLTANWLGYSELG
AIKSLRTLRALRPLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFA
GKYYRCVNTTSGELFEISVVNNKSDCMALLHTNEVRWVNVKVNFDNVGLGYLSLLQVATF
KGWMDIMYAAVDSREIEEQPSYEINLYMYIYFVIFIIFGAFFTLNLFIGVIIDNFNQQKK
KFGGKDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPSNKFQGMVFDFVTKQVFDITIMILI
CLNMVTMMVETDDQSELKTDILYKINLVFIVIFTGECVLKMFALRYYYFTIGWNIFDFVV
VILSIAGIVLSDIIEKYFVSPTLFRVIRLARIGRVLRLIRGAKGIRTLLFALMMSLPALF
NIGLLLFLVMFIYSIFGMSNFAYVKKEAGIDDIFNFETFGNSIICLFQITTSAGWDGLLS
PILNSGPPDCDPELENPGSSVKGNCGNPSIGIFFFCSYIIISFLIVVNMYIAIILENFNV
ATEESSEPLCEDDFEMFYETWEKFDPDATQFIAYSTLSDFVDTLQEPLKIPKPNKIKLIT
MDLPMVAGDKIHCLDILFALTKEVLGDSGEMDALKATMEEKFMAANPSKVSYEPITTTLK
RKHEEVCATKIQRAFRRYLLRRSVKQASYMYRHSKDEDALRGDAPEKEGLIATKMHEMYG
NSGTDVETAPAFSLAPVPSSETQDAPGEVKVWDGKRIVKESLV
NT seq
5532 nt
NT seq
+upstream
nt +downstream
nt
atggccggcctgccgcacatcccgggccccgagaacctccgccccttcacccccgagtcg
ctggctgccatcgagcagcgcatcgccgaggcagaggcgctcaagataaagcggcagcag
gtggagctgcccgaggaagaggagctcaagcccagcagtgacctggaagctggcaagaac
ctgcccctcatctatggtgacccccccgtggagctcatcgggacgcccctggaggacctg
gaccctttctacaaggataagaagactttcatagtcctcaacaaagggaagtccatcttc
cgcttctcggcaactcctgccctctacctgctgggtcctttccaccccatccggagagga
gccatcaaagtgctcatccattcatgttttaaattattcagcatgttcatcatgatcaca
attttaaccaactgcgtgtttatgacattgagcaacccaccggcgtggtccaagaatgtg
gaatacaccttcactggaatttacacctttgagtccctcatcaagatactgtcgagaggc
ttctgcattgatgactttacattcctgcgtgacccatggaattggctggacttcatggtc
atctccatggcctacatcaccgagttcgtggacctggggaacatatctgctctcaggacc
ttccgcgtcctccgtgccttgaaaaccatcacagtgataccagggctgaagacgatcgtt
ggggcgctcatccagtcagtgaagaagctctcggatgtcatgatcctcactgtcttctgc
ctgagtgtctttgccctcattggcctccagctcttcatgggaaacctccggcacaagtgt
gtgcggtggccccccctcaatgacaccttgctgggggacttcgggctggacaacaacaca
ttggccaatgcaacgctctacagcaacttcaccgacagtattgacagcaacttcaccagc
aacagcacgtttgattttgaggcctacatcaatgatgaagcaaatttctactttctggag
ggagcgcttgatgccctgctctgcgggaacagcagcgatgctgggaagtgccctgaggga
tacgaatgcatgaaggcagggaggaaccccaactacggctacaccagctacgacaccttc
agctgggctttcctggcactgttccgcctcatgacgcaggacttctgggagaacctcttc
cagctgaccctgcgtgcagcagggaaaacatacatgatcttcttcgtggtggttatattc
ctgggttccttctacctaatcaacctcatcctggcggtggtggccatggcctatgcggaa
caaaatgatgccacaatgctggaggcacagcagaaggaggaggaatttcagcagctcatg
gagcagctgaagaagcaccaggaggagcaagagaagcagttgcagaacaggcggtccagc
agcggctccctgcgcagcagcacggctgagaagaagagcgactcggacctgaacagtgac
caggacaaggtgaaggactgcaatgggcgagtggtccccaaggtggtgctggagcggtcc
gccacggtgattgaattcaacccaggcaatgagacggagaaatcagactacaaccacctc
actgtgggcaaccaagatgggccaggccttgagaagagagtggggagtgccatcagcgtc
atctccaacgccgtggaagagctggaggaggctcaccagaagtgcccaccttggtggtac
aaatttgctcacacgttcctgatctgggactgctgccttccatggctgaagctgaaggag
tttgtcaagctggtggtgatggacccctttgtggacctgggcatcaccatctgcatcgtg
ctcaacacgctcttcatggccatggagcactaccccatgacggaggagtttgagaacgtg
ctgactgtggggaacctggtctttacgggaatcttcacagcagagatggtcctgaagcta
attgcgttggacccctatgagtatttccagcagggctggaacatatttgacagcatcatc
gtcaccctgagcttggtggagctgggtctggccaacgtgcaggggctctccgtgctccgc
tccttccgcttgctgagggttttcaaactcgccaagtcctggcccaccctcaacatgctg
atcaagatcattggcaactcagtgggtgctctggggaatctcaccctggtgttggccatc
atcgtcttcatcttcgccgtggtggggatgcagctcttcgggaagagctacatggagtgc
gtgtgcaagatctccctggactgcacactgccccgctggcacatgcatgacttcttccac
tccttcctcatcgtcttccgcatcctctgcggggagtggatcgagaccatgtgggactgc
atggaggtggccggccagaccatgtgcctcattgtcttcatgatggtcatggtcattggg
aacctcgtggtcctgaacctgttcttagctttgctgctgagttccttcagtgccgatagc
ctggcagcatcagatgatgatggcgagatgaacaacttgcagattgctattggcagaatc
accagggggatcgactttgtaaagagctctgtcctcatgctgctccgcaggctgtggaag
gggaagaaggtggccccagaggaagagcaggagcccagcaagggggacaattctgcgctg
aaccacgtggacactggccaggagcccaagtcagagtacatggacggagtcactgggaaa
gagtatttgttcatggatgaactggaccacatgaatttcattaacaaccccaacctgacg
gtgcaggttcccattgcctcggaggagtccgacctctacgaggaggagacgagcacccag
tcagacaccgaggatgccacggtgagaaagaaccccctctccagcgacaatgcctcgtcc
ctgtgcagcaccgtggattacaagccaccgctgccggaggaggaggcagtggcagaagag
gctgaggacagcaacgagcctgaggagtgcttcaccgaagcctgtgtgaagaggtttccc
tgcctctacgtggacatcaccagcgagagagggaaggtctggtggaacatccggaaaacc
tgcttccgcatcgttgagcacgactggttcgagaccttcattgtcttcatgattctcctc
agcagtggggcactggcttttgaggacatctacattgaacagcgacgggtgatacgcacc
atcctggagtacgccgacaaggtcttctcctacgtcttcatccttgagatgttgctcaag
tgggtggcctacggcttcaaggtttacttcaccaacgcatggtgctggctggatttcctc
atcgtcgatgtttctattgtcagcctgacagcaaactggctgggatactccgagctggga
gccatcaagtccctgcggacactgagggccctgagaccactgcgcgccctgtccagattt
gaagggatgcgggtggtggtgaatgccttgctgggtgccatcccctccatcatgaacgtt
ctgctggtctgcctcatcttctggctgatattcagcatcatgggggtgaacctctttgcg
gggaagtactaccgatgcgtaaacaccacctcgggggaactctttgaaatcagtgtggtg
aacaataagagtgactgcatggctctcctccacaccaacgaggtcagatgggtcaatgtc
aaggtcaactttgacaacgtgggcttgggatacctgtccttgctgcaggtggcaaccttc
aaaggctggatggacatcatgtacgctgctgtggactcacgtgagattgaagaacagcca
tcgtacgagatcaacctctacatgtacatctacttcgtcatcttcatcatctttggtgcc
ttttttaccctgaacctcttcatcggtgtcatcattgacaacttcaaccagcagaagaaa
aagtttggaggcaaagacatcttcatgacggaagagcagaagaaatactataatgccatg
aagaagctcggctccaagaaaccccagaagcccatccccaggccctcgaacaagtttcaa
gggatggtgtttgactttgttaccaagcaagtgtttgacataaccatcatgatcctgatt
tgtcttaacatggtgaccatgatggtcgaaacagacgatcaaagcgagctcaaaacagac
atcctctacaaaatcaacttggttttcatcgtcatcttcactggagagtgtgtgctaaaa
atgttcgccttgcgctactactacttcactatcggctggaatatatttgactttgtggtg
gtcatcctctccattgcaggtattgtcctctcggacatcatagagaagtacttcgtatca
cccacgctcttcagggtcatcaggctggcaaggattggccgtgtcctccgactgatccga
ggagcaaaaggtatccggactctcctgtttgctctgatgatgtccctgcctgccctcttc
aacattggcctcctgctgttcctcgtcatgttcatctactccatctttgggatgtccaac
ttcgcctacgtaaagaaagaggcagggatcgatgacatcttcaactttgaaacttttggg
aacagcatcatctgcctcttccagatcaccacatcggcaggatgggatggtctgctcagc
cccatcctcaacagtggccctcctgattgcgaccccgaactggagaaccctggcagttca
gtaaaagggaactgtggcaatccatccattggcatcttcttcttctgcagctacatcatc
atttcctttcttattgtggtgaacatgtacatcgccatcatcctggagaatttcaacgtg
gccacagaggagagcagcgagccgctctgtgaagatgattttgaaatgttttatgaaacg
tgggagaagtttgacccagatgccacccagttcatcgcgtacagcacgttgtctgacttt
gtggacaccttgcaggagccgctcaaaattcctaagccaaacaagatcaagctgatcacc
atggatctaccgatggttgctggggacaaaatccactgtctggatattctctttgccctg
acaaaggaagtgctgggagactcgggagagatggatgccctgaaggccaccatggaggag
aagttcatggccgcgaacccctcaaaggtttcctatgaacccatcaccaccactctgaaa
aggaagcacgaggaagtgtgtgctacaaaaatccagagggctttccggaggtacctcctg
aggcgctcagtgaagcaggcctcctacatgtacaggcacagtaaggatgaagacgccctg
agaggggacgcgcctgagaaggaaggtctgatcgcaaccaaaatgcatgagatgtatggg
aacagtgggacagatgtggagacagccccggcctttagccttgcacctgtgccaagctca
gagactcaagatgctcccggtgaagtgaaagtgtgggatgggaaacgcattgtgaaggag
tcgcttgtataa
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integrated database retrieval system
