Bucephala clangula (common goldeneye): 308453300
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Entry
308453300 CDS
T11949
Symbol
TNFAIP3
Name
(RefSeq) tumor necrosis factor alpha-induced protein 3
KO
K11859
tumor necrosis factor, alpha-induced protein 3 [EC:
3.4.19.12
]
Organism
bcla Bucephala clangula (common goldeneye)
Pathway
bcla04217
Necroptosis
bcla04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
bcla00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
308453300 (TNFAIP3)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
308453300 (TNFAIP3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
bcla01002
]
308453300 (TNFAIP3)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bcla04121
]
308453300 (TNFAIP3)
Enzymes [BR:
bcla01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
308453300 (TNFAIP3)
Peptidases and inhibitors [BR:
bcla01002
]
Cysteine peptidases
Family C64
308453300 (TNFAIP3)
Ubiquitin system [BR:
bcla04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
OTU
308453300 (TNFAIP3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-A20
OTU
OTU_Vertnin
Motif
Other DBs
NCBI-GeneID:
308453300
NCBI-ProteinID:
XP_080821414
LinkDB
All DBs
Position
2:complement(58952902..58967419)
Genome browser
AA seq
808 aa
AA seq
DB search
MAGQHVLPQALYQSNMLKAVKIRERTPEDLVKPPNGIIHHFRTMHRYTIEMFRMCQFCPQ
FRETLQKALTDQATQTSLERQRKLNWCMEVRRLVPLKTNGDGNCLMHAASQYMWGIEDID
LVLRKTLFSALREIDTRNFKLRWQREAIKSQEFVETGLRYDTRNWEEEWEYLIEMTSPET
SGARNRLPYNALEEIHIFVLANILRRPIIVLADKVVRSLESGSSFAPLNVGGVYLPLLWP
AEECYRYPIVLGYDNMHFTPLVTLKDSGPEIRAVPLVTSERGRFEDLSVHFLTDAEEREK
EQLLKDYLIVIEIPVQGWDHGTTHLINAAKLDEGNLPKEINLVEDYFQLVQHEYKKWQEN
AEPARRETCSRTRQDLSFSQLSLLQVKCETPNCPFYMSVNTQPYCHECFEQRSQGTKGRK
QTPKAAPEKLKVAGSGSSRGEVCEPGGWMSEESVAGPRSAPPTAPSLFLYSETTAMKCRT
PDCPFTLNVQHNGLCERCYNSRQRAPCNNVDDQRQVDYATCKGCLQKANRTFNGMCSTCF
KRTTELSSNGGPGFLSTCHQRSTSDPSQMSPSLLQHPCHQAPNNCEEPPLAPLPPAPHSP
EEKRGSKLCRKPGCKFFGTAQNEGFCTLCFFEYRENHDSSLLRHQRRSQRNSSAAGQQGS
SAAAFHKNMSCQQRNCGTLGSTMLEGYCQNCFIKAQSQRFQEARRTEEQLVRQPERTGQR
RDLQRAAMTSQKRQCAVASCRNNLACRSEDLCQECQRRSQITQLGSPREPAADETPKQRC
RAPACDHYGNTKCNGYCNECYQFKQIYG
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atggctggccaacatgtccttcctcaggctttgtatcagagcaatatgctgaaagctgtg
aagatcagagagagaacacctgaagatctggtcaaaccccccaatggaataattcaccac
ttcaggactatgcacagatacaccatagaaatgttcagaatgtgccagttttgccctcag
tttcgggaaacgcttcagaaggcgctgactgaccaggccacccagacttcactggagcgc
cagaggaagctgaactggtgcatggaagtcaggagacttgtgcctttgaagactaatggt
gatggaaattgcctcatgcatgctgcatctcagtacatgtggggtattgaagatattgac
ctcgtcttaagaaaaacgttgtttagcgccctccgggagattgatacgcggaacttcaag
ctgcgctggcagcgggaggctattaagtcccaggagtttgtagagacaggactccgctat
gacacccggaactgggaggaggagtgggaatatctcattgaaatgacctctccagaaaca
tctggggctcgaaacaggcttccttataacgcactggaagaaatccacatcttcgtcctt
gctaacatcctcagaagaccaatcattgtcctcgcagataaagtggtgagaagcttagag
tcaggctccagttttgctcctctgaacgttggcggtgtttacctgccactcctttggcca
gcagaagaatgctacagatatccaattgtgcttggctacgacaatatgcattttacacct
ctagtgaccctgaaggatagtgggccagagatccgggctgtccctctggtcaccagcgaa
cgaggcagatttgaggatttgagcgtgcactttctgacggatgcggaggagagggaaaaa
gagcagctgctaaaggactacttgatagtcatagaaattccagtgcaaggctgggatcat
ggtacaactcacctaatcaatgctgcgaagttggatgaaggcaacctacccaaagaaata
aaccttgtggaggattactttcaactggtgcagcatgagtacaagaaatggcaggagaat
gctgagcctgctagaagagagacctgctccaggaccagacaggatctgtctttttcccag
ctctccctcttacaggtgaaatgtgaaactccgaactgccctttctatatgtctgtgaac
actcagccctactgccatgagtgctttgagcagaggtcacagggaaccaaaggcagaaag
cagacccctaaagcagcacctgagaaactaaaagtagctggatcaggctcctcccgcggt
gaggtctgtgaacctgggggatggatgtctgaagagtctgtagcagggcctcgctccgcg
cctccaactgctccgagcctcttcctctacagtgaaaccactgccatgaaatgcaggacc
ccagactgtcccttcaccttgaacgtgcaacacaacgggctttgcgaacgctgctacaat
tccagacagcgcgctccttgtaacaatgtggatgaccagagacaggtagactatgccacg
tgtaaagggtgcctgcagaaggccaacaggacctttaatggcatgtgcagcacttgtttc
aaaaggactacagaactctcctcgaatggcggccctggttttctgtccacgtgccaccag
agatctacatctgacccatcccagatgtcacccagcctccttcagcatccttgccatcag
gctcccaacaactgtgaagagccaccgctggcaccgctgcctcctgccccacacagtccg
gaggagaagaggggaagtaaactctgcaggaaacctggctgcaagttctttggaaccgct
cagaatgagggcttctgcacgctgtgtttctttgagtacagggaaaaccatgacagttct
ttgctacgccatcagaggagatctcagaggaattcctcagcagctggtcagcaagggagc
tctgctgcagccttccacaaaaacatgtcctgccagcagcgcaactgtggcaccctgggt
agcaccatgctggaaggctactgccagaactgtttcattaaagcccagagccagcgattt
caggaagccagaaggacagaggaacagctcgtgagacagcccgaaagaacaggacagcgc
agagatctgcagcgagcagcaatgactagccagaagagacagtgtgcagtggcttcgtgt
cggaacaacctggcctgcaggagtgaggatctgtgccaggagtgccagcgccgcagccag
atcacgcagctggggagtcccagggagccagctgcagacgagaccccgaagcagcgctgc
cgagcccctgcttgtgaccactatggcaataccaagtgcaatggttactgcaacgagtgc
taccagttcaaacagatctatggctag
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