Bucephala clangula (common goldeneye): 308454050
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Entry
308454050 CDS
T11949
Symbol
VDR
Name
(RefSeq) vitamin D3 receptor
KO
K08539
vitamin D3 receptor
Organism
bcla Bucephala clangula (common goldeneye)
Brite
KEGG Orthology (KO) [BR:
bcla00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
bcla01009
]
308454050 (VDR)
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bcla03000
]
308454050 (VDR)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
bcla03310
]
308454050 (VDR)
Protein phosphatases and associated proteins [BR:
bcla01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
308454050 (VDR)
Transcription factors [BR:
bcla03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
308454050 (VDR)
Nuclear receptors [BR:
bcla03310
]
1. Thyroid hormone like
1I. Vitamin D3 like receptor
308454050 (VDR)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
PCF11_charged
Motif
Other DBs
NCBI-GeneID:
308454050
NCBI-ProteinID:
XP_080822522
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All DBs
Position
30:2378227..>2395250
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AA seq
429 aa
AA seq
DB search
METVAASTSLPDPAGEFDRNVPRICGVCGDRATGFHFNAMTCEGCKGFFRRSMKRKAMFT
CPFNGDCKITKDNRRHCQACRLKRCVDIGMMKEFILTDEEVQRKREMILKRKEEEALKES
LKPKLSEEQQKVIDILLEAHHKTYDPTYSDFTKFRPPVRSRSSSRVAARSSSMLTQDFSS
EDSTDAFGSDAFSTFPESVEPPMFSNLVLSEENDESSSMNIEFSHLSMLPHLADLVSYSI
QKVIGFAKMIPGFRDLTAEDQIALLKSSAIEVIMLRSNQSFTLEDMSWTCGSTDFKYKVS
DVTQAGHSMDLLEPLVKFQVGLKKLNLHEEEHVLLMAICILSPDRPGVQDTSLVEAIQDR
LSDTLQTYIRCRHPPPGSRLLYAKMIQKLADLRSLNEEHSKQYRCLSFQPEHSMQLTPLV
LEVFGNEIS
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atggagaccgtggctgccagcacgtcgcttcccgacccagccggcgagttcgacaggaac
gtgccccgaatctgtggggtctgtggggacagggccacgggcttccacttcaacgccatg
acctgcgaaggctgcaagggcttcttcaggcgaagcatgaagaggaaggcgatgttcacg
tgtccgttcaacggcgactgcaaaatcaccaaggacaaccggcggcactgccaggcctgc
cggctgaagcgctgcgtggacatcggcatgatgaaggagttcatcctgacggacgaggag
gtccagaggaagcgcgagatgatcctgaagcgcaaggaggaggaggcgctgaaggagagc
ctgaagcccaagctctcggaggagcagcagaaagtcatcgacatcctcctggaggcccac
cacaagacctacgaccccacgtactctgacttcaccaagtttcggcccccagtgagaagc
aggtccagcagcagggtggcggcgcggtcctcctccatgctcacccaggacttctcctcg
gaggactccaccgacgccttcggctccgatgccttcagcacgttccccgagtccgtggag
cccccgatgttctccaacctggtcctgtccgaggagaacgacgagagctcctccatgaac
atcgagttctcccacctctccatgctgccccacttggccgacctggtcagctacagcatc
cagaaggtgatcggctttgccaaaatgatcccgggattcagggatctgaccgcagaggac
cagatcgccctgctgaaatccagcgccatcgaggtgatcatgctgcgctcaaaccagtcc
ttcaccctcgaggacatgtcgtggacctgcggcagcactgacttcaagtacaaagtcagc
gatgtcacccaagccggccacagcatggacctgctggagccgctggtgaaattccaggtg
ggcctgaagaagctgaaccttcacgaggaagagcacgtgctgctcatggccatctgcatc
ctgtccccagaccgccccggcgtgcaggacacctcgctggtggaggccatccaggatcgc
ctctcggacaccctgcagacctacatccgctgccggcaccctcctcccggcagccgcctg
ctctacgccaagatgatccagaagctggccgacctgcgcagcctcaacgaggagcactcc
aagcagtaccgctgcctctccttccagcccgagcacagcatgcagctcacgccgctggtg
ctcgaggttttcggcaacgagatctcctga
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