Evansella cellulosilytica: Bcell_0432
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Entry
Bcell_0432 CDS
T01389
Name
(GenBank) DNA ligase, NAD-dependent
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
bco
Evansella cellulosilytica
Pathway
bco03030
DNA replication
bco03410
Base excision repair
bco03420
Nucleotide excision repair
bco03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bco00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Bcell_0432
03410 Base excision repair
Bcell_0432
03420 Nucleotide excision repair
Bcell_0432
03430 Mismatch repair
Bcell_0432
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bco03032
]
Bcell_0432
03400 DNA repair and recombination proteins [BR:
bco03400
]
Bcell_0432
Enzymes [BR:
bco01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
Bcell_0432
DNA replication proteins [BR:
bco03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Bcell_0432
DNA repair and recombination proteins [BR:
bco03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
Bcell_0432
NER (nucleotide excision repair)
GGR (global genome repair) factors
Bcell_0432
MMR (mismatch excision repair)
DNA ligase
Bcell_0432
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Bcell_0432
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
HHH_5
DNA_ligase_ZBD
Nlig-Ia
HHH
PTCB-BRCT
RNA_pol_A_CTD
5_3_exonuc
HHH_8
BRCT_2
DUF4796_N
Motif
Other DBs
NCBI-ProteinID:
ADU28714
UniProt:
E6TWN1
LinkDB
All DBs
Position
468832..470844
Genome browser
AA seq
670 aa
AA seq
DB search
MAKDDIKQEIDRLTNILNDYAYHYYVLDQPKVSDAEYDQLLHELTKLEEAYPEWKRDDSP
SERVGGQPLEHFSKVQHDVPMLSLSNAFNEEELRDFDRRVRQGLGHEPTYSCELKIDGLA
VTLKYEQGRFVQGATRGDGTVGEDITSNLKTVPSIPLRLKEAVTIEVRGEAFMPKRSFIR
LNEAKEKNGEQLFANPRNAAAGSLRQLDPKIAAKRSLDIFIYSVGKVEGEDIPSHHGALN
YVKELGFKTNEHQKHCKTIDEVIDYCESWLSKRADLPYEIDGIVIKVDALADQEQLGFTA
KSPRWATAYKFPAEEVVTTLLDIELSVGRTGVITPTAILEPVSVAGTTVQRASLHNEDLI
RELDLKLGDKVTIKKAGDIIPEVVNVLVEQRTGEERDFSMPTQCPECHSELIRIEGEVAL
RCVNPKCPAQIREGLIHFVSRNAMNIDGLGERVITQLFNHKLIEDVADLYKLERQLLLNL
ERMGEKSVDNLLRAIEASKENSLEKLLFGLGIRHVGAKAAKTLAQHFNTIDQIQNATRED
LEAINEVGEKMADAVVTYFETPEVKELISELEALDINLEYKGPNINVSDDANNAYFSGKT
VVLTGTMEQMARGDAKKEIEARGGNVTGSVSSKTDLLIAGEKSGSKLKKAQDLNIEIWDE
ARFLEELTKE
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaggatgacataaaacaagaaattgaccgattaaccaatatattaaatgattat
gcctaccattattatgtgctagatcaaccaaaggtttctgatgctgaatatgatcagcta
ttacatgagctgacgaagctagaagaggcgtatcctgaatggaaacgtgatgactcacct
agtgaacgtgttggcggacaacctttagagcatttcagtaaagtgcagcatgacgtaccg
atgcttagtttatcaaatgcttttaacgaagaagagttacgcgactttgaccgtcgtgta
cgccaagggttaggccatgaaccgacatatagctgtgagttaaaaatagacggtcttgct
gttacgttgaaatatgagcaaggacgatttgtacaaggggcaacgcgtggggatggaacg
gttggtgaagacatcactagtaatttgaagaccgttccgtctattccattaagactaaaa
gaggcggttacaatcgaagttcgaggggaagcttttatgcctaagcgttcatttattcgt
ttgaatgaagcgaaggaaaaaaatggagaacagctttttgccaatcctcgaaatgctgct
gcaggatcattaaggcagttggatccaaaaattgcagcgaaacgaagcttagatattttt
atttattcagttggtaaagtggaaggggaagacattccttcacaccatggcgcgttaaac
tatgtcaaagagcttggctttaaaacaaacgagcatcaaaagcattgtaaaacgattgac
gaagtaatcgattactgtgagagttggcttagtaaaagagctgatcttccttatgaaata
gatggaattgttataaaagtggatgcacttgcagatcaagagcaattaggctttaccgct
aaaagtccaagatgggcaaccgcatataaatttccagctgaagaagttgttacgacgtta
ttggatattgagctaagtgttggtaggacaggagttattacaccgacagcaatattagag
ccggtgtcggtagctgggacaaccgttcaacgtgcttccttgcataatgaagacctcatt
cgggaattggatttaaagcttggtgataaagtcacgatcaaaaaagctggagatattatt
ccggaagtggtcaacgttcttgttgaacagcgtactggtgaagaacgagatttttccatg
ccaacacaatgccctgaatgccacagtgagttaatccgtattgaaggagaagtagctcta
cgctgcgttaatccaaaatgccctgctcaaatacgagaaggcctcatccattttgtttct
agaaatgcgatgaacattgacggtttaggggagagggtcattacacagctatttaatcat
aagctcattgaagatgtagctgacttgtataagctagagagacaattactgctaaactta
gagcgtatgggtgaaaaatcggttgataatttattacgagcgatagaagcgagtaaagag
aactcactcgagaagcttttgtttggattaggtatacgtcatgtaggtgcaaaagcagca
aaaactttagcgcaacactttaacacgatagatcaaatacagaatgcaactcgtgaagat
ctagaagctattaatgaggttggagaaaaaatggcagatgcggttgtcacatattttgaa
acacctgaagtgaaggagcttatctctgaactagaagcattagatatcaacttagaatat
aaaggaccaaacatcaatgttagtgatgatgcaaataatgcatatttctctggtaaaaca
gtagtacttactggtacgatggaacagatggcacgaggggatgcaaagaaagagatagaa
gctcgtggtggtaatgttacaggcagtgttagtagtaaaacagaccttttaattgccggg
gaaaaatctggctcaaaattgaaaaaagcacaagatttgaatattgaaatatgggatgaa
gcaagatttttagaagagttaacaaaggaatag
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