Baudoinia panamericana: BAUCODRAFT_104610
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Entry
BAUCODRAFT_104610 CDS
T03106
Name
(RefSeq) hypothetical protein
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
bcom
Baudoinia panamericana
Pathway
bcom03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bcom00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BAUCODRAFT_104610
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bcom03019
]
BAUCODRAFT_104610
Messenger RNA biogenesis [BR:
bcom03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
BAUCODRAFT_104610
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_29
AAA_25
DUF3584
AAA_23
AAA_15
PduV-EutP
AAA_28
ORC-CDC6-like
RsgA_GTPase
AAA_16
AAA_22
SRP54
AAA_30
AAA_13
Motif
Other DBs
NCBI-GeneID:
19107092
NCBI-ProteinID:
XP_007674744
JGI:
Bauco1_104610
UniProt:
M2NEX2
LinkDB
All DBs
Position
Unknown
AA seq
276 aa
AA seq
DB search
MATGPTIEVKNLSFTFPDSTSGLLDIALDLPGGSRTLLIGANGAGKTTLLRLLSGKRMAP
GGTISVAGIDPFATGLEGVTYLGLEWVLNPIVRTDIAVPELLKSVGGDHYPNRRDELVQI
LDVDLSWHLHAVSDGERRRVQLCMGLLRPWRVLLLDEITVDLDLLSRHNFLTFLKRETET
RSCTIVYATHILDNLAAWPTHLVHMAQGKVKKWGAMESFTVPEVGDGVEGNSRLGQLVLQ
WLREDLSERGPRNGQSAEGKTYENLEGKGGYGAETK
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atggcgacggggccaacgatcgaggtgaagaacctcagcttcaccttccccgacagcacc
tctggtctccttgacatcgcccttgacctaccaggcggctcacgaactctgctcatcggc
gcgaatggcgccggtaagaccaccctgttacgcctcctttctggcaaacgtatggcacca
ggaggaacaatttccgtggccggcatcgaccctttcgccacgggactagaaggcgtaacg
tatctgggacttgagtgggtgctgaaccccatcgttcgtacggacatcgctgtaccggag
ctattaaagtctgtaggcggcgaccactatcccaaccgtcgcgatgagctcgtgcagatc
ctcgatgtagacctcagctggcatttgcacgctgtatccgacggcgagcgtcgacgcgta
cagctctgcatgggcctcttgcggccctggcgtgtcctactcctcgacgaaatcaccgtg
gatctcgacctgctaagccgacataacttcctcaccttcctcaagcgagaaacggagacg
cgaagttgtaccattgtttatgcgacgcacatcctcgacaaccttgctgcttggcctacg
cacttggtgcacatggctcagggcaaggtgaagaagtggggcgccatggagtccttcacc
gtaccggaggtgggcgacggcgtcgaaggcaacagtcgcctgggccagctggtactgcag
tggctgcgtgaggatctaagtgagaggggtccacgcaacggacagtctgcggaaggcaag
acttatgaaaatttggagggcaaaggtggttacggtgccgagacaaagtga
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