Baudoinia panamericana: BAUCODRAFT_34952
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Entry
BAUCODRAFT_34952 CDS
T03106
Name
(RefSeq) hypothetical protein
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
bcom
Baudoinia panamericana
Pathway
bcom03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bcom00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
BAUCODRAFT_34952
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bcom03041
]
BAUCODRAFT_34952
Spliceosome [BR:
bcom03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
BAUCODRAFT_34952
Complex C
U5 SnRNP specific factors
BAUCODRAFT_34952
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_IV
EFG_C
GTP_EFTU_D2
EFG_III
EFL1
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
19112567
NCBI-ProteinID:
XP_007677373
JGI:
Bauco1_34952
UniProt:
M2LKZ2
LinkDB
All DBs
Position
Unknown
AA seq
986 aa
AA seq
DB search
MDDLYDEFGNYISEEVDEDEEEQPADNAYAQYLDDDAEPAAAPTGQELMEVDDGPSNAVV
LHEDKQYYPSASQLYGPGVETLVQEEDTQTLQQPIVEPVIHKKFTVEEDDLPPVYFDRGF
LTDLMSFPEQIRNIAFCGHLHHGKTSLMDMLVAQTHDVSKLRLGLKGEERDQPMRYTDTH
VLERERGLSVKASPMSLVLQGTSGKSHLLNMLDTPGHVNFADELAASMRLVDGVVLVVDV
VEGVQTQTELAIKHAVLSNLPVVLLVNKMDRLILELKLPPTDAYFKVKHVVEEVNTYIES
VIPGRGERFRVSPEKGNVAFACGSMGWCLTLPSFAKMYADTYPISQFDPSEFARRLWGDI
FFNPGSRKFTRKAVEERAKRSFVHFVLEPIYKLYSHTISESPQDLRKTLEELGIFLKPSQ
LRANAKDLLKLVCEQFFGPATGLVDMIVQHVPSPQKGAKRMLDQFYTGPQDTKTATSMLE
CDAEGPLVVHITKLFNTSDAKGFYSFGRVMSGTVQAGQQVRVLGENYSIDDEEDMVNTTI
EAVWIAESRYNVPVSGVPAGNFVLMSGVDNSIVKTATLVAPKLPNEEDAYIFKPVAHFFE
SVFKVAVEPINPSELPKMLDGLRKINKSYPLITTKVEESGEHVVLGTGELYMDCVLHDLR
RLYAQMEIKVSDPVTRFCETCVDQSAIQCYAITPNKKNKLTFVAEPLDDGIAEDIERGKV
SIKDPVRTVGKFFEENYGWDLLASRNIWAFGPEEMGPNILQNDTLPSEVDQKILRSVRDG
IKQGFSWGTREGPLCEEPIRNTKFRLTNVDLASEAIFRGGGQIIPTARRACYSSFLMASP
RLMEPVYAATMLGPLNTVKAFYTVLARRRGHVLTDAAVPGTPLYSVRGLIPVIDSFGFET
DLRIHTQGQATVSLVFEKWEVVPGDPLDRSVKLRPLEPAPVQGTARDFVLKTRRRKGLSE
DVGVGRFLEPELVRSLRESGVLDVGS
NT seq
2961 nt
NT seq
+upstream
nt +downstream
nt
atggacgacctgtacgacgagttcggcaactacattagcgaagaagtcgacgaagatgaa
gaagaacaacccgccgacaatgcctacgcgcagtatctggatgatgatgcggaacctgct
gctgccccgaccggacaggagcttatggaggtcgatgatgggccttctaatgcggtagta
ttacacgaagacaagcaatattacccttccgcctctcaactctatggtccaggtgtcgag
acgcttgtccaagaagaagacacgcagactctacaacagcctatcgtggagcctgtcatc
cataagaaatttaccgtcgaggaagacgatctcccgcccgtctacttcgatcgcggcttt
cttaccgaccttatgagctttccggaacaaattcggaatattgccttttgtggtcatctg
catcacggcaagaccagcttgatggacatgcttgttgcgcaaacgcatgatgtctcgaaa
ctgcgcctcggtctcaaaggcgaggagcgcgaccaaccgatgcgatatacggacacgcat
gtgctagagcgcgagcgaggattaagcgtcaaagcgagtcccatgagtcttgtgttgcaa
ggcacgagtggcaaaagtcacctcctcaacatgcttgacacaccgggccatgtcaacttc
gcagacgagttagctgcctccatgcggctggttgatggcgtggtgttggtggttgacgtg
gtggagggcgtgcagacgcagacagagcttgcgattaagcacgctgtactctcaaacttg
ccggtagtccttctggtcaacaagatggaccgtctaattctggagctcaaactgccaccc
accgacgcttactttaaggtgaagcatgttgtggaagaagtcaacacctacatcgagtcc
gttatacctggtcgaggcgaacgcttccgtgtcagccctgagaagggcaacgtcgctttc
gcctgtggcagtatgggctggtgcctcaccttacctagcttcgcgaagatgtacgcggac
acgtatcccatttcgcagttcgacccctccgagttcgcacgacggttatggggcgacatt
ttcttcaaccctggttcacgcaagtttacacggaaagcagtggaggagagagcgaagcgc
agcttcgtgcatttcgtgctagaaccgatttataagttgtacagccataccatttccgag
tcaccgcaggatttgaggaaaacgctcgaggaattgggcatcttcctcaagccctcgcag
ctgcgggccaacgccaaagatctgctgaagctggtctgcgaacaattctttggccctgcg
acggggctagtagatatgattgttcagcatgtcccttcgccccagaagggcgcaaagaga
atgctggatcaattctacactggaccacaagacacgaagacggcgacgagcatgctggag
tgcgatgcagaggggccgctggtagtgcacatcacgaagctgttcaacacgtctgacgcc
aaaggcttctactcttttggccgagtcatgagcgggactgtgcaagctggccaacaggtg
agagtgctaggcgagaactacagtattgacgacgaagaggacatggttaataccacgatc
gaggcggtgtggatcgcagaaagccggtacaacgtgcctgtttccggcgtgccagccggc
aacttcgtgctgatgagtggcgttgacaacagcattgtcaagactgccacgcttgtagcg
ccgaagctgccgaatgaggaggatgcatacattttcaagcccgttgctcacttcttcgaa
agcgtttttaaagtggctgtggagccgatcaacccgtcggagctgccgaaaatgctagac
ggattgcgcaagatcaataagtcttatccgctcatcactacgaaagtcgaggagagtgga
gagcacgttgtgctaggtacaggcgagctgtacatggactgcgtgctccacgatctccgc
cggctgtacgcacagatggagatcaaagtctccgatcccgtaacgaggttctgcgagacg
tgcgtcgaccagtccgccattcagtgctatgctatcacgcccaacaagaagaataagctc
accttcgtcgcggagccgttggacgacggcatcgcagaagacatcgagcgcggtaaagtc
agcatcaaagaccctgtgcgtaccgtcggcaagttcttcgaggagaattacgggtgggac
ctactcgccagccgcaacatctgggcgtttgggccggaagaaatgggtcccaatatcctg
caaaacgacacgctgccgagcgaggtcgatcagaagatcctccgctcggtacgagacggc
atcaagcaaggattcagctggggtacgagggaggggccgctctgcgaagaaccgatccgt
aacaccaagttccgcctcacgaacgtcgatctcgcttccgaggccatcttccgtggtggt
ggacagattattcccacggcgcggcgagcatgctactcttcctttcttatggccagtccg
cggctcatggagcctgtctatgccgccactatgctcggaccgctgaacacagtcaaagcg
ttctacaccgttctcgctcgccggcggggccacgttctcacagacgctgctgtgcccgga
actccactctactcagtccgtggactgatacctgtgatcgactcgtttgggttcgagacc
gatcttcggatacacacccaagggcaggcaacggtgagtttagtgtttgagaagtgggag
gttgtgccgggagatccgttggatcggagtgtgaagctcaggccgttagaacccgcgcct
gtgcaagggacggcgagggacttcgtgttgaagacgagaaggaggaaggggttgagtgaa
gatgttggcgtaggaaggtttctggagccggagttggtgaggagtctgagggagagtggt
gtgctggatgtaggaagctga
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integrated database retrieval system
