Bradysia coprophila: 119078791
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Entry
119078791 CDS
T08269
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm3
KO
K12622
U6 snRNA-associated Sm-like protein LSm3
Organism
bcoo
Bradysia coprophila
Pathway
bcoo03018
RNA degradation
bcoo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bcoo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119078791
09123 Folding, sorting and degradation
03018 RNA degradation
119078791
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bcoo03019
]
119078791
03041 Spliceosome [BR:
bcoo03041
]
119078791
Messenger RNA biogenesis [BR:
bcoo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
119078791
mRNA degradation factors
5'-3' decay
Lsm complex
119078791
Spliceosome [BR:
bcoo03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
119078791
Complex C
U2 snRNP components
119078791
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
RimP_C
TIG_SUH
Glutaredoxin
HydF_dimer
DUF8043
Motif
Other DBs
NCBI-GeneID:
119078791
NCBI-ProteinID:
XP_037042399
LinkDB
All DBs
Position
Unknown
AA seq
101 aa
AA seq
DB search
MAEDDQMQIISVKEPLDLIRLSLDEKIYVKMRNERELKGRLHAFDQHLNMVLGDAEETVT
TVEIDEETYEEVYKTTKRTIPMLFVRGDGVILVSPPMRVGG
NT seq
306 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagacgatcagatgcaaattatttccgtcaaggagccgcttgatctgattcga
ttaagtttggacgagaaaatctatgtgaagatgcgtaatgaacgtgaacttaagggcaga
cttcatgcattcgatcaacatttgaacatggtactcggagatgccgaagaaaccgtcaca
actgttgaaatcgatgaagagacctacgaggaagtctacaagacgacaaaacgtacaatc
ccaatgctgtttgttcgaggcgatggagtcatactggtgtctccaccgatgagagttggc
ggataa
DBGET
integrated database retrieval system
