Bacillus cereus AH187: BCAH187_A0378
Help
Entry
BCAH187_A0378 CDS
T00799
Symbol
ligA
Name
(GenBank) DNA ligase, NAD-dependent
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
bcr
Bacillus cereus AH187
Pathway
bcr03030
DNA replication
bcr03410
Base excision repair
bcr03420
Nucleotide excision repair
bcr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bcr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BCAH187_A0378 (ligA)
03410 Base excision repair
BCAH187_A0378 (ligA)
03420 Nucleotide excision repair
BCAH187_A0378 (ligA)
03430 Mismatch repair
BCAH187_A0378 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bcr03032
]
BCAH187_A0378 (ligA)
03400 DNA repair and recombination proteins [BR:
bcr03400
]
BCAH187_A0378 (ligA)
Enzymes [BR:
bcr01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
BCAH187_A0378 (ligA)
DNA replication proteins [BR:
bcr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
BCAH187_A0378 (ligA)
DNA repair and recombination proteins [BR:
bcr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
BCAH187_A0378 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BCAH187_A0378 (ligA)
MMR (mismatch excision repair)
DNA ligase
BCAH187_A0378 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
BCAH187_A0378 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
OB_DNA_ligase
HHH_2
BRCT
HHH_5
DNA_ligase_ZBD
RNA_pol_A_CTD
HHH
PTCB-BRCT
RNA_ligase
BRCT_2
Nlig-Ia
HHH_3
5_3_exonuc
Motif
Other DBs
NCBI-ProteinID:
ACJ78426
UniProt:
B7HSW5
LinkDB
All DBs
Position
336981..338990
Genome browser
AA seq
669 aa
AA seq
DB search
MSKEIAKKRIEELRDLLNTFNYQYHVLDNPSVSDAEYDRNMQELIKLEAENPEFMSEDSP
SVRVGGTVLDIFEKVTHKSPMLSLGNAFNEGDLRDFDRRVRQGIDDANVRYICELKIDGL
AVSLHYEKGRFIQGATRGDGVTGEDITQNLKTIKAIPLRLNEEVTLEARGEAYMPKRSFV
KLNEEKEQNGEDVFANPRNAAAGSIRQLDPKIAAKRNLSMFVYGLANVEEKTILSHSESL
DFLGELGFKTNPNRRTCETIEEVIAYVEEWQEKRPHLDYEIDGIVIKVDDVALQESLGTT
AKSPRWAIAYKFPAEEVVTRLTGIELSVGRTGVVTPTAELEPVRVAGTIVRRASLHNEDL
IREKDIRIGDYVVVKKAGDIIPEVVNVLFDKRTGEEEEYHMPTHCPACESELVRLEEEVA
LRCINPTCPAQIREGLIHFVSRNAMNIDGLGERVITQLFEADYIRTFADLYSLTKEQLLQ
LERFGEKSATNLVQAIENSKENSLERLLFGLGIRHVGAKAARTFAEHFETMDALVKATEE
ELKAINEIGEKMAQSVVAYFDNEDVLELLQQFKEYGVNMTYKGMKIADLQNVESYFAGKT
VVLTGKLEVMGRSEAKKKIEALGGKVTGSVSKSTDLVVAGEAAGSKLAQAEKHNVEVWNE
ERFLQELNK
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaagagatagcaaaaaaacgtatagaagaattacgtgatttgttaaatacattt
aactatcaatatcacgtattagacaatccttctgtttctgatgcggagtatgaccgtaat
atgcaggagcttataaaattagaagcagagaatccagagtttatgagtgaagattctccc
tccgttcgcgttgggggaacggttcttgatatatttgaaaaagtaacacataagtcaccg
atgttaagtttaggaaatgcatttaacgaaggggatttacgtgattttgaccgacgagta
cgtcaaggaattgatgatgcgaatgtaagatatatatgcgaattaaaaattgacggactt
gctgtttcacttcattatgaaaaaggacgcttcattcaaggggcaacacgtggtgatggt
gtaacaggtgaagatattacccaaaatttaaaaacgattaaagcaatcccgcttcgttta
aatgaagaagtaacgttagaggcacgaggcgaagcttatatgccgaagcgttcattcgtt
aagttaaatgaagaaaaagagcaaaatggtgaagatgtatttgcgaatccgcgtaatgcg
gcagcaggttcaatccgccaacttgatccgaaaattgcagcgaagcgtaacttatctatg
tttgtatacggtcttgcgaatgtagaagaaaaaacaatcctatcacatagtgaatcgctt
gatttcttaggtgaacttggattcaaaacaaatccaaatcgacgcacatgtgaaacaatt
gaagaagttatagcttatgtagaagaatggcaagaaaaacgtccgcatcttgattatgag
attgatgggatcgttataaaagtagatgatgtcgctcttcaagaaagtctaggcactaca
gcaaagagtccaagatgggcaattgcttataaattcccagctgaagaagttgtaacaaga
ttaacaggcattgaattaagtgttggtcgtacaggggttgtaacaccgactgcagagcta
gagccagtgcgagtggctggtacgatcgttcgtcgtgcttctttacataacgaagattta
attcgtgaaaaagatattcgaattggtgactacgttgttgtgaagaaggctggagatatt
attcctgaagttgtgaatgttcttttcgataagcgtactggtgaggaagaagaatatcat
atgccaacgcattgtccagcatgtgagagtgaactagttcgtttagaagaagaggtagca
cttcgttgtataaatccaacttgtcctgctcaaattcgagaagggttaatccatttcgtt
tcaagaaatgcaatgaatattgatggacttggagaacgtgtcattacacaactctttgag
gcagattatattcgtacatttgctgatttatattcgttgacgaaagagcaattattacag
ctagaacgattcggagaaaaatcagcaacgaatttagtacaagcaattgagaattctaaa
gaaaactcattagagcgattattattcggtcttggtattcgccatgtcggagcgaaagca
gcacgtacatttgctgagcattttgaaacgatggatgcacttgtgaaagcgacagaagaa
gaactaaaagcaattaacgagattggtgaaaaaatggctcaatccgtcgtggcgtatttt
gataatgaagacgtattagagttattacaacaatttaaagaatacggcgtgaacatgaca
tataaaggcatgaaaattgctgatttacaaaacgttgagtcgtacttcgcaggaaaaact
gtcgttttaacagggaaattagaagttatgggacgtagtgaagcgaagaagaagattgag
gcattaggtggaaaagtaacaggaagtgttagtaaaagtacggatttagttgttgcaggt
gaagcggcaggttcgaaattagcacaagcggagaaacataatgtcgaggtttggaatgaa
gagaggttcttacaagagctaaataagtaa
DBGET
integrated database retrieval system
