Bacillus cereus AH820: BCAH820_0337
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Entry
BCAH820_0337 CDS
T00814
Symbol
ligA
Name
(GenBank) DNA ligase, NAD-dependent
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
bcu
Bacillus cereus AH820
Pathway
bcu03030
DNA replication
bcu03410
Base excision repair
bcu03420
Nucleotide excision repair
bcu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bcu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BCAH820_0337 (ligA)
03410 Base excision repair
BCAH820_0337 (ligA)
03420 Nucleotide excision repair
BCAH820_0337 (ligA)
03430 Mismatch repair
BCAH820_0337 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bcu03032
]
BCAH820_0337 (ligA)
03400 DNA repair and recombination proteins [BR:
bcu03400
]
BCAH820_0337 (ligA)
Enzymes [BR:
bcu01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
BCAH820_0337 (ligA)
DNA replication proteins [BR:
bcu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
BCAH820_0337 (ligA)
DNA repair and recombination proteins [BR:
bcu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
BCAH820_0337 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BCAH820_0337 (ligA)
MMR (mismatch excision repair)
DNA ligase
BCAH820_0337 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
BCAH820_0337 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
HHH_5
DNA_ligase_ZBD
RNA_pol_A_CTD
Nlig-Ia
HHH
PTCB-BRCT
BRCT_2
HHH_3
5_3_exonuc
Motif
Other DBs
NCBI-ProteinID:
ACK87832
UniProt:
B7JM96
LinkDB
All DBs
Position
321216..323225
Genome browser
AA seq
669 aa
AA seq
DB search
MSKEIAKKRIEELRDLLNTFNYQYHVLDNPSVSDAEYDRNMQELIKLEAENPEFMSEDSP
SIRVGGTVLDIFEKVTHKSPMLSLGNAFNEGDLRDFDRRVRQGIDDANVRYICELKIDGL
AVSLHYEKGRFIQGATRGDGVTGEDITQNLKTIKAIPLRLNEEVTLEARGEAYMPKRSFV
KLNEEKEQNGEDVFANPRNAAAGSIRQLDPKIAAKRNLSMFVYGLANVEEKTIPSHSESL
DYLGELGFKTNPNRRTCETIEEVIAYVEEWQEKRPHLDYEIDGIVIKVDDVALQESLGTT
AKSPRWAIAYKFPAEEVVTRLTGIELSVGRTGVVTPTAELEPVRVAGTIVRRASLHNEDL
IREKDIRIGDYVVVKKAGDIIPEVINVIFDKRTGGEEEYHMPTHCPACESELVRLEEEVA
LRCINPTCPAQIREGLIHFVSRNAMNIDGLGERVITQLFDADYIRTFADLYSLTKEQLLQ
LERFGEKSATNLVQAIENSKENSLERLLFGLGIRHVGAKAARTFAEHFETMDALVKATEE
ELKAINEIGEKMAQSVVAYFDNEDVLELLQQFKEYGVNMTYKGIKIADLQNVESYFAGKT
VVLTGKLEVMGRSEAKKKIEALGGKVTGSVSKSTDLVVAGEAAGSKLAQAEKHNVEVWNE
ERFLQELNK
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaagagatagcaaaaaaacgtatagaagaactacgtgatttgttaaatacattt
aactatcaatatcacgtattagacaatccttctgtttctgatgcggagtatgaccgtaat
atgcaggagcttataaaattagaagcagagaatccagagtttatgagtgaagactctccc
tctattcgagttgggggaacggttcttgatatatttgaaaaagtaacacataagtcaccg
atgttaagtttaggaaatgcatttaacgaaggagatttacgtgattttgacagacgagta
cgtcaaggaattgatgatgcgaatgtaagatatatatgcgaattaaaaattgacggactt
gctgtttcacttcattatgaaaaaggacgcttcattcaaggggcaacacgtggtgatggt
gtaacaggtgaagatattacccaaaatttaaaaacgattaaagcaatcccgcttcgttta
aatgaagaagtaacgttagaagcacgaggcgaagcttatatgccgaagcgttcattcgtt
aagttaaatgaagaaaaagagcaaaatggtgaagatgtatttgcgaatccgcgtaatgcg
gcagcaggttcaatccgccaacttgatccgaaaattgcagcgaagcgtaacttatctatg
tttgtatacggtcttgcgaatgtagaagaaaaaacaatcccatcacatagtgaatcgctt
gattacttaggtgaacttggattcaaaacaaatccaaatcgtcgtacatgtgaaacaatt
gaagaagttatagcttatgtagaagaatggcaagaaaaacgtccgcatcttgattatgag
attgatgggatcgttataaaagtagatgatgttgctcttcaagaaagtctaggaactaca
gcaaagagtccaagatgggcgattgcttataaattcccagcggaagaagttgtaacaaga
ttaacgggcattgaattaagtgttggtcgtacaggagttgtaacaccgactgcagagcta
gagccagtgcgagtggctggtacgatcgttcgtcgtgcttctttacataacgaagattta
attcgtgaaaaagatattcgaattggtgactacgttgttgtgaagaaagctggagatatt
attccagaagttataaatgttatttttgataagcgtactggtggggaagaagaatatcat
atgccaacgcattgcccagcatgtgagagtgaactagttcgtttagaagaagaggtagca
cttcgttgtataaatccaacttgtcctgctcaaattcgagaagggttaatccatttcgtt
tcaagaaatgcaatgaatattgatggtcttggagaacgtgttattacacaactctttgat
gctgattatattcgtacatttgcggatttatattcgttgacgaaagagcaattattacag
ttagaacgattcggagaaaaatcagcaacgaatttagtacaagcaattgagaattctaaa
gaaaactcattagagcgattattattcggtcttggtattcgccatgtcggagcgaaagca
gcacgtacatttgcagagcatttcgaaacgatggatgcacttgtgaaagcgacggaagaa
gaattaaaagcaattaacgagattggtgaaaaaatggctcaatccgtcgtggcgtatttt
gataatgaagacgtattagagctattacaacaatttaaagagtatggcgtgaatatgaca
tacaaaggtataaaaattgctgatttacaaaatgttgagtcgtactttgcaggaaaaact
gtcgttttaactgggaaattagaagttatgggacgtagtgaagcgaagaagaagattgag
gcattaggtggaaaagtaacaggaagtgttagtaaaagtacggatttagttgtcgcaggt
gaagcggcaggttcgaaattagcacaagcggagaaacataatgttgaggtttggaatgaa
gagaggttcttacaagagctaaataagtaa
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