Bifidobacterium dentium Bd1: BDP_1974
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Entry
BDP_1974 CDS
T01143
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
bde
Bifidobacterium dentium Bd1
Pathway
bde03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bde00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BDP_1974 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bde03400
]
BDP_1974 (nth)
Enzymes [BR:
bde01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
BDP_1974 (nth)
DNA repair and recombination proteins [BR:
bde03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BDP_1974 (nth)
Prokaryotic type
BDP_1974 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
Motif
Other DBs
NCBI-ProteinID:
ADB10549
UniProt:
D2Q6K8
LinkDB
All DBs
Position
2238253..2238918
Genome browser
AA seq
221 aa
AA seq
DB search
MPRESKAARLKRMHHEYEELCETIPEPKCALNFTNPFELLVATVLSAQTTDKRVNMVTPV
LFGRFPGPADLQAADPEQVEDIIHSIGFHRTKTKNIIRLSHDLCERYDGTVPDSMEELTA
LPGVGRKTANVVLGNAFDKPGFPVDTHVIRVTGRLHWRSDWASPTPDPVAIEREITACFP
PSEWTDLSHRLIMHGRTTCHARKPNCLDCPLNDTCPSAFKV
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atgccacgagagtccaaagcagcgcgcctgaaacgcatgcaccatgaatacgaggaattg
tgcgagacgattcccgagccgaagtgcgcgctgaatttcaccaatccctttgagttactg
gtggcgaccgtgctcagcgcccagaccaccgacaagcgcgtgaatatggtcacgcccgtg
ctgttcggccggtttccgggacccgccgacctgcaggccgccgatcccgaacaggttgag
gacatcatccattccatcggcttccaccgcaccaaaacgaagaacatcatcagactctcg
cacgacctgtgcgaacgatatgacggcacagtgcccgattcgatggaggaactgaccgca
ttgcccggagtcggccgcaaaaccgcgaacgtggtattgggcaacgccttcgacaaacca
ggatttcccgtcgacacgcatgtgattcgtgtgaccggacgtctgcactggcgtagtgac
tgggcttcgcccactccggatccggtggccattgaacgcgaaatcaccgcatgcttccca
ccctcggaatggacggacctgtctcaccggctgatcatgcatggcagaaccacctgtcac
gcccgcaaaccgaactgcctcgactgcccgttgaacgatacctgcccgagtgcgttcaag
gtgtag
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