Bradyrhizobium daqingense: LPJ38_00010
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Entry
LPJ38_00010 CDS
T07756
Name
(GenBank) multidrug efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
bdg
Bradyrhizobium daqingense
Pathway
bdg01501
beta-Lactam resistance
bdg01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
bdg00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LPJ38_00010
01503 Cationic antimicrobial peptide (CAMP) resistance
LPJ38_00010
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bdg02000
]
LPJ38_00010
01504 Antimicrobial resistance genes [BR:
bdg01504
]
LPJ38_00010
Transporters [BR:
bdg02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
LPJ38_00010
Antimicrobial resistance genes [BR:
bdg01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
LPJ38_00010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
Motif
Other DBs
NCBI-ProteinID:
UFS89220
LinkDB
All DBs
Position
complement(571..3732)
Genome browser
AA seq
1053 aa
AA seq
DB search
MPSFFIDRPIFAWVVALFICLIGAIAVPLLPIAQYPIIAPPSISVSTSYPGASPENLYNS
VTRLIEEELNGAANILNFESTSDSLGQVEIIANFQPGTDTSAASVEVQNRIKRVEARLPR
AVMQQGILIEEASSAVLQIITLNSTDGSLDEVGLGDFMIRNVLGEIRRIPGVGRATLYST
ERSLRVWVDPAKLVGYGLTADDVNKAITAQNAQVASGSIGAEPSTSNQRTSALVLVKGQL
SSPDEFGAIILRANADGSTVRLRDVARVEVGGLSYQFNTRLDGKPTAGLSVLMSPTGNAL
ATASAVEAKMKELSRFFPANITYEIPYNITPVVEASIKKVLTTLVEAVVLVFVVMFLFLQ
NIRYTIIPTIVVPVALLGACTTLLLAGYSINMLSMFGMVLAVGILVDDAIVVVENVERIM
AEEGLSPKEATRKAMSQITSAIIGITLVLMAVFVPMAFFPGSVGIIYRQFSVTMVAAIGF
SAFLALSLTPALCATLLKPVEAGHGHAKGGVFGWFNRMLEGAKERYARTVGFSLGRTGRL
MLVYAALLVGLSWAFVNLPGGFLPVDDQGFITTDVQTPSDSSYARTEAVIEKVEKYLAQR
PGVDNVTFLTGFSFSGQGMNTAQAFITLKDWSERGPKDSAAAIVNDVNRDLGASIRDAKI
SALQPPPIDNLGNSSGFSFRLQDRGQKGYQQLMRAADQLIAEANASPVLQKVYIEGLPEA
GVVNLVIDREKAGAFGVTFEDINNTISTNLGSNYINDFPNRGRMQRVVVQADARDRMRTE
DILNYNVKNSRGQLVPFSSFATVEWARGPTQIAGFNYYPAVRISGEARAGFTSGDAIAEM
ERLAGRLPRGFGYEWTGQSLQEKLSGSQAPFLLALSVFVVFLCLAALYESWTIPLAVLLT
VPLGIVGAVVAATLRSLPNDVYFTVGLITIIGLAAKDAILIIEFAKDLRKEGKPLVEATI
EACRLRFRPILMTGLAFICGVLPMAIAHGAGGASQQALGSVVMGGMIAVVILALLMVPVF
FVSVQRVLGGDREPKAEKQAKPYGPPARAHPGH
NT seq
3162 nt
NT seq
+upstream
nt +downstream
nt
atgccgagtttcttcatcgacaggccgatcttcgcctgggtggttgcgctgttcatctgt
ctgatcggcgcaatcgcggtgccgctgctgccgatcgcgcaatacccgatcatcgcgccg
ccctcgatctcggtctcgaccagctatcccggcgcctcgcccgaaaacctctacaacagc
gtcacgcggctgatcgaggaggagctcaacggcgccgccaacatcctcaacttcgaatcg
accagcgactcgctcggccaggtcgagatcatcgccaacttccagccgggcaccgatacc
agcgccgcctcggtcgaggtgcaaaaccgcatcaagcgcgtcgaagcgcgcctgccgcgc
gcggtgatgcagcagggcatcctgatcgaggaggcctcgagcgcggtgcttcagatcatt
acgctgaactcgaccgacggcagcttggatgaggttggtctcggcgacttcatgatccgc
aacgtgctgggcgagatccgccggattcccggcgtcggccgcgccacgctgtattccacc
gagcgcagcttgcgcgtctgggtcgatccggccaagctcgtcggctacggcctgaccgcc
gacgacgtcaacaaggccatcaccgcgcagaacgcgcaggtcgcctccggcagcatcggc
gccgagccgtcgacgtcgaaccagcgcacctcggcgctggtgctggtcaagggccagctg
tcgtccccagacgagttcggcgcgatcatcctgcgcgccaatgccgacggttcgaccgtg
cgcctgcgcgacgtcgcgcgcgtcgaggtcggcggtctcagctaccagttcaacacgcgc
ctcgacggcaagccgaccgccggcctttcggtgctgatgtcgccgaccggcaacgcgctg
gcgaccgcaagcgcggtcgaagccaagatgaaggagctgtcgcgcttcttcccggccaac
atcacctacgagattccctacaacatcacgcccgtggtcgaggcctcgatcaagaaggtg
ctgacgacgctggtcgaagccgtggtgctggtgttcgtggtgatgttcctgttcctgcag
aacatccgctataccatcatcccgaccatcgtggtgcccgtggcgcttctcggggcctgc
accacgcttctgctcgccggctactccatcaacatgctttcgatgttcggcatggtgctc
gcggtcggtatcctcgtcgatgacgccatcgtcgtggtcgagaacgtcgagcgcatcatg
gccgaggaaggcctgtcgccgaaggaagcgacgcgcaaagccatgtcgcagatcaccagc
gccatcatcggcatcaccctggtgctgatggcggtgttcgtgccgatggcgttcttcccc
ggttcggtcggaatcatctaccggcagttttcggtcaccatggtcgccgcgatcggcttc
tccgccttcctggcgctgtcgttgacgccagcattgtgcgcgaccctgctcaagcccgtc
gaggccggtcacggtcacgccaagggaggcgtgttcggctggttcaaccgcatgctcgaa
ggcgccaaggagcgctatgcgcgcaccgttggcttctcgctgggccgcaccggccgcctg
atgctggtctatgccgcgctgctggtcggcctgtcctgggccttcgtcaacctgcccggc
ggcttcctgcccgtcgacgaccagggcttcatcaccactgacgtgcagacgccgtcggat
tcgtcctatgcccgcaccgaggccgtgatcgagaaggtcgagaaatatctggcgcagcgg
ccgggcgtcgacaacgtcaccttcctcaccggcttcagcttctccggccagggcatgaac
accgcgcaggcgttcatcaccctgaaggattggtcggagcgcgggccgaaggactccgcc
gccgcgatcgtcaacgacgtcaatcgcgacctgggcgcgtcgatccgcgacgcgaaaatc
tcggcgctgcagccgccgccgatcgacaatctcggcaactcctccggcttctcgttccgt
ctccaggaccgcggccagaagggctaccagcaattgatgcgcgccgccgatcagctgatc
gccgaggccaatgcgagcccggtactgcagaaggtctatatcgaaggcctgcccgaggcg
ggcgtggtcaatctcgtgatcgaccgcgagaaggccggcgccttcggcgtcaccttcgag
gacatcaacaacacgatctcgaccaatctcggttcgaactacatcaacgacttcccgaac
cgcggccgcatgcagcgcgtcgtggtgcaggcggacgcgcgcgaccgcatgcggaccgag
gacatcctcaactacaacgtcaagaacagccgcggccagctggtgccgttctcgtccttt
gccacggtggagtgggcgcgcgggccgacgcagatcgccggcttcaactattatccggcg
gtgcgcatctccggtgaagccagggccggcttcacctcgggcgacgccatcgccgagatg
gagcggctcgccggccggttgccgcgcggcttcggctatgaatggaccgggcagtcgctg
caggagaagctctcgggctcgcaggcgccgttcctgctggcgctgtccgtgttcgtggtg
ttcctgtgccttgccgcactctacgaaagctggaccattccgctggcggtgctgctcacc
gtcccgctcggcatcgtcggcgcggtcgtcgccgcgacgctgcggagcctgcccaacgac
gtctacttcaccgtcggcctgatcaccatcatcggcctcgcggcaaaggacgcgatcctg
atcatcgagttcgcgaaggatctgcggaaagaaggcaagccgctggtcgaagccaccatc
gaggcctgccgcctgcgcttccgcccgatcctgatgacgggccttgccttcatctgcggc
gtgctgccgatggccatcgcccacggcgccggcggcgccagccagcaggcgctcggcagc
gtcgtgatgggcggcatgatcgcggtggtgatcctggcgctgctgatggtgccggtgttc
ttcgtctcggtgcagcgtgtgctgggcggggaccgcgagccgaaggcggagaagcaagcc
aagccgtatgggccgccggcgcgggcgcatccgggtcattga
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