Bradyrhizobium daqingense: LPJ38_00485
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Entry
LPJ38_00485 CDS
T07756
Symbol
metH
Name
(GenBank) methionine synthase
KO
K00548
5-methyltetrahydrofolate--homocysteine methyltransferase [EC:
2.1.1.13
]
Organism
bdg
Bradyrhizobium daqingense
Pathway
bdg00270
Cysteine and methionine metabolism
bdg00450
Selenocompound metabolism
bdg00670
One carbon pool by folate
bdg01100
Metabolic pathways
bdg01110
Biosynthesis of secondary metabolites
bdg01230
Biosynthesis of amino acids
bdg04980
Cobalamin transport and metabolism
bdg04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
bdg00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
LPJ38_00485 (metH)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
LPJ38_00485 (metH)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
LPJ38_00485 (metH)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
LPJ38_00485 (metH)
04980 Cobalamin transport and metabolism
LPJ38_00485 (metH)
Enzymes [BR:
bdg01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.13 methionine synthase
LPJ38_00485 (metH)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Met_synt_B12
S-methyl_trans
Pterin_bind
B12-binding_2
B12-binding
Motif
Other DBs
NCBI-ProteinID:
UFS89311
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Position
102206..106051
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AA seq
1281 aa
AA seq
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MTVPTSPKRTALLNAARERILVLDGAMGTMIQNLQLDEAAFRGERFKNFHRDLRGNNDLL
ILTQPQAIEDIHAAYLRAGADIVATNTFSTTSIAQADYDLTDIVYEMAREGARLAGNAAR
RVEAEDGKPRFVAGAIGPTNRTASISPDVSNPGYRAVTFDDLRKSYGEQINGMLDGGVDL
LLVETIFDTLNAKAALYAIAEITEARGIDVPVMVSGTITDKSGRLLSGQMPEAFWNSVRH
AKPVTIGFNCALGAEDLRAHIADIGRVADTLVCAYPNAGLPNEFGQYDESPDYMARLIGE
FARDGLVNIVGGCCGTTPDHIAAIAAAVAPHKPRIVPEIQPRLRLSGLEPFVLTDAIPFV
NVGERTNVTGSAKFRKLITAGDYTAALQVARDQVENGAQIIDVNMDEGLLDSEAAMVTFL
NLVAAEPDIARVPVMVDSSKFSVIEAGLKCVQGKPVVNSISMKEGEEKFIHEAKIARRHG
AAVVVMAFDEIGQADTFARKTEICKRAYDILVNKVGFPPEDIIFDPNIFAIATGIEEHNN
YGVDFIEATRWIRQNLPGAHISGGVSNLSFSFRGNEPVREAMHSVFLYHAIKAGMDMGIV
NAGQMIVYDDIDAELRQTCEDVVLNRDAGASERLLALAEKFRGKKTESKEADLAWREWPV
EKRLSHSLVHGITEFIEQDTEEARKSSSRPLDVIEGPLMAGMNVVGDLFGDGKMFLPQVV
KSARVMKQAVAWLMPFMEEEKARNLANGIGTEGSSSAGKIVLATVKGDVHDIGKNIVGIV
LQCNNFEVIDLGVMVPAAKIVETVKAEKADIVGLSGLITPSLDEMAFFAGELQREGLKLP
LLIGGATTSRVHTAVKIDPSYRAGPVVHVNDASRAVGVASALLSPEKREAYAADVRAEYA
KISEAHLRAQADKKRLKLADARANRVPIDFAKSKPMKPTFLGTRSFDEYDLAELVPYIDW
TPFFQTWELAGRFPAILDDAKVGEVARSLYDDARKMLDTIVKEKWFRARATIGFWPANAQ
GDDIVLYADESRTKPIATLHTLRQQLEKREGRFNAALADFIAPAGVPDYIGGFVVTAGIG
EDAVADRFKMANDDYSSILCKALADRLAEAFAERMHARVRREFWAYAPDEALTSEELILE
KYQGIRPAPGYPAQPDHTEKATLFELLDAEATAGVKLTESFAMWPGSSVSGLYFANPESY
YFGVGKIERDQVEDYAARKGMTVAETERWLAPVLNYIPSREDKAFAARPANDETPEDLAS
HPPGCTCAVHLVWQRKRAGAG
NT seq
3846 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtgcccacctcacccaagcgaactgccctgctcaatgccgcgcgcgagcgcatc
ctcgtgctcgacggcgccatgggcacgatgatccagaacctccagctcgacgaggccgcc
ttccgcggcgagcgcttcaagaacttccatcgcgacctgcgcggcaacaacgacctgttg
atcctgacccagccgcaggcgatcgaggacatccacgccgcgtacttgcgcgccggcgcc
gacatcgtcgcgaccaacaccttctccaccacgtcgatcgcgcaagccgattacgatctc
accgacatcgtctacgagatggcgcgcgaaggcgcccgcctcgccggcaacgcggcacgg
cgcgtcgaggccgaagacggcaagccgcgcttcgttgcgggtgccatcggcccgaccaac
cgcaccgcctcgatctcgcccgacgtctccaatcccggctaccgcgccgtcaccttcgac
gacttgcgcaaatcctacggcgagcagatcaacggcatgctcgacggcggcgtcgatctg
ctgctggtcgagaccatcttcgatacgctgaacgccaaggcggcgctctatgcgatcgcc
gagatcaccgaagcgcgcggcatcgacgttccggtgatggtctcgggcaccatcaccgac
aaatccggccgcctgctctcgggccagatgccggaggcgttctggaactcggtgaggcac
gccaagcccgtcactattggtttcaattgcgcactcggcgccgaggatctgcgggcgcat
atcgccgatatcggccgcgtcgccgacacgctcgtctgcgcctatccgaacgccggcctg
cccaacgagttcggccagtatgacgagagcccggactacatggcccgcctgatcggcgaa
tttgcgcgcgacggcctcgtcaacatcgtcggcggctgctgcggcaccacgccggaccac
atcgcggcgattgcggccgccgtcgccccgcacaagccgcgcatcgtgccggagatccag
ccgcgcctgcggctctccggccttgagcccttcgtgctgacggacgccattcccttcgtc
aatgtcggcgagcgcaccaacgtgacgggctctgcgaaattccgcaagctaatcaccgcc
ggcgattacacggccgcgctgcaggtcgcgcgcgaccaggtcgagaacggtgcgcaaatc
atcgacgtcaacatggacgaaggcctgctcgattccgaagcggcgatggtgaccttcctc
aacctcgtggccgccgagccggacatcgcccgcgtgcccgtgatggtcgactcgtcgaaa
ttctccgtgatcgaagccggcctgaaatgcgtgcagggcaagccggtcgtcaactcgatc
tcgatgaaggagggcgaggagaagttcattcacgaagccaagatcgcccgccgccatggc
gcggccgtcgtcgtcatggccttcgacgagatcggccaggccgacacgttcgcgcgcaag
accgagatctgcaagcgcgcctacgacatcctggtgaacaaggtcggcttcccgcccgag
gacatcatcttcgatcccaacatttttgcgatcgcgaccggcatcgaggagcacaacaat
tacggcgtcgacttcatcgaggcgacgcgctggatccgccagaacctgcccggcgcacac
atctcgggcggcgtctccaacctgtcgttctcgttccgcggcaacgagccggtgcgcgaa
gccatgcactcggtgttcctgtatcacgccatcaaggccggcatggacatgggcatcgtc
aatgccgggcagatgatcgtctatgacgacatcgacgccgagctgcgccagacctgcgag
gacgtcgtcctcaaccgcgatgcgggcgcgagcgaacgcctcttggcgttggcggagaaa
ttccgcggcaagaagaccgaaagcaaggaagccgatctcgcctggcgcgaatggccggtg
gaaaagcggctgtcgcattcgctggtgcatgggatcaccgaattcatcgagcaggacacc
gaggaagcccgcaagagctcgtcgcgtccgctcgacgtgatcgagggcccgctgatggcc
ggcatgaacgtggtcggcgacctcttcggcgacggcaagatgttcctgccgcaagtggtg
aagtcggcgcgcgtgatgaagcaggcggtggcctggctgatgcccttcatggaggaggag
aaggcacgcaatctcgccaacggcatcggcaccgagggctcatcgtccgccggcaagatc
gtgctggcgacggtgaagggcgacgtccacgacatcggcaagaacatcgtcggcatcgtg
ctccagtgcaacaatttcgaggtcatcgacctcggcgtgatggtgcccgcggcgaagatc
gtcgagaccgtgaaggcggagaaggccgacatcgtcgggctgtcgggcctgatcacgccc
tcgctcgacgagatggcgttcttcgccggcgagttgcagcgcgaaggcctgaagctgccg
ctattgatcggcggcgccaccaccagtcgcgtgcacaccgccgtcaagatcgacccgagc
tatcgcgccggtcctgtcgtgcacgtcaacgacgccagccgcgccgtcggcgttgcctcc
gcactgctgtcgccggagaagcgcgaggcctatgccgccgacgtccgtgccgaatacgca
aaaatctcggaggcgcatctgcgcgcgcaggccgacaagaagcgcctgaagctcgccgat
gcccgcgccaaccgcgttcccatcgatttcgcgaagagcaagccgatgaagccgactttc
ctcggcacccgcagcttcgacgaatacgatcttgctgaattggtgccctacatcgactgg
acgccgttcttccagacctgggagctcgcgggccgcttccccgccatcctcgacgacgcc
aaggtcggcgaggtcgcgcgctcgctctatgacgacgcgcgcaagatgctcgacaccatc
gtgaaggaaaaatggttccgggcgcgcgcgacgatcggcttctggccggccaatgcgcaa
ggcgacgacatcgtgctctatgccgacgagagccgtaccaagccgatcgcgacgctgcac
acgctgcgccagcagctggagaagcgcgaaggccgcttcaacgcggcgctcgccgacttc
atcgcgccggcaggcgtgcccgactatatcggcggcttcgtcgtcaccgccgggatcggc
gaggatgcggtcgccgatcgcttcaagatggccaacgacgattattcctcgatcctgtgc
aaggcgctggccgaccgcctcgccgaggcctttgccgagcgcatgcatgcccgcgtgcgc
cgcgagttctgggcctatgcaccggacgaggcgctcacgagcgaggagctgatcctggaa
aagtaccagggcatccgtcccgcgcccggctatcccgcccagcccgatcacaccgagaag
gcgacgctgttcgagctgctcgacgccgaagcaaccgccggcgtgaagctgaccgagagc
tttgcgatgtggccgggctcgtcggtgtcggggctctatttcgcaaaccctgagagctat
tatttcggcgtcggcaagatcgagcgcgaccaggtcgaggactacgccgcgcgcaaaggc
atgaccgtagcggagacggagcgctggctcgcgccggtgctcaattacatcccgtcgcgg
gaggacaaggctttcgcggcaaggccggccaacgacgagacgcctgaggacctcgcctcg
cacccgccgggctgtacctgcgcggtgcatctggtctggcaaaggaagcgcgctggggcg
gggtaa
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