Bradyrhizobium daqingense: LPJ38_05820
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Entry
LPJ38_05820 CDS
T07756
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
bdg
Bradyrhizobium daqingense
Pathway
bdg01501
beta-Lactam resistance
bdg01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
bdg00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LPJ38_05820
01503 Cationic antimicrobial peptide (CAMP) resistance
LPJ38_05820
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bdg02000
]
LPJ38_05820
01504 Antimicrobial resistance genes [BR:
bdg01504
]
LPJ38_05820
Transporters [BR:
bdg02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
LPJ38_05820
Antimicrobial resistance genes [BR:
bdg01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
LPJ38_05820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
Motif
Other DBs
NCBI-ProteinID:
UFS90300
LinkDB
All DBs
Position
1254848..1257985
Genome browser
AA seq
1045 aa
AA seq
DB search
MALNISAWSIRNPLPSVVFSIILLILGWVSFTKLAVTRLPSADIPVISVVVSQFGAAPAE
LESQVTKTVEDAVSGVEGVRHITSSITDGVSVTTIQFALETNTDRALNDVKDAVTRVRSN
LPQNVTEPLIQRVDVIGLPIVTYAAISPGKTPEQLSYFVDDVVKRALQGVRGVAQVERIG
GVEREILVSLDPDRLQAMGLTAVNVSQSLRGTNVDVAGGRAEIGKNDQAIRTLAGAKTLG
DLAGTMIPLFGGGEVRLDDLGTVTDTIADRRTFARFNGEPIVALGIKRSKGASDVKVAEA
VQKRIDALKAAYPDVDLKVIDTSVEYTNGNYHAAISTLFEGAILAVVIVLLFLRDLRATI
IAAVSLPLSIFPAFWAMDLLGFSLNLVSFLAITLSTGILVDDAIVEIENIVRHMNMGKSP
YRAALEAADEIGLAVIAISLTIIAIFAPASFMSGIAGQFFKQFGITVSVQVFFSLLAARF
VTPVLAAYFLKHGQHEEPPPGRVLRAYHGIVAWSVKHYFITVLVGLGVFAASIWSITLLP
QGFLPAQDSARSLLALELPPGTQLAYTEKVTEDIVARLRKRPEVKSIFVDGGRVPPGTQE
VRRASLIINYTPKDDRDITQRELESSISQELENVPDIRFWFLDENGLRAISLVVTGVDAN
IVNNFASELATQMKRIPTISNVISETTLERPELRVEPRADLAARLGVSTESLSQTIRVAT
IGDVGPALAKFDVGDRLVPIRVQLEDAARGNLKTLEQLRVPLGERGEKGGVPLSVIADVK
LDQGPTSINRYDRERQATVAADLVGSAALGDATKKINDLPVMKSRPKGVKVSPSGDAESL
NELSDGFATAITAGLMMVYAVLVLLFGTFLQPITILFSLPLSIGGAIAALLLTGKQLTTP
VWIGILMLMGIVTKNAIMLVEFAIEAIKAGKPREEAMIDAGMKRARPIVMTTIAMAAGMI
PSALAVGAGGEFRSPMALAVIGGLIFSTILSLVFVPAMFMVMDDFGALIWRFAKRLIVHS
EDAEIDGHQAPAEAAPASVSRPAAE
NT seq
3138 nt
NT seq
+upstream
nt +downstream
nt
atggctctcaatatctcggcatggtcgattcgcaatccgctgccgtcggtcgtcttctcg
atcatcctcctgattctcggctgggtctccttcaccaagctcgcggtgacgcggctgccg
tcggccgacattcccgtcatctcggtcgtggtctcgcaattcggtgcggcgcctgccgaa
cttgaatcgcaggtcaccaagacggtcgaagacgccgtctccggcgtcgagggcgtgcgc
cacatcacctcctcgatcaccgacggcgtgtcggtcaccacgatccagttcgcgctcgag
accaacaccgaccgcgcgctcaacgacgtcaaggacgcggtaacgcgcgtgcgctccaat
ttgccgcagaacgtcaccgagccgctgatccagcgcgtcgacgtgatcggcctgccgatc
gtcacctacgccgcgatctcgcccggcaagacgccggagcagctctcttatttcgtcgac
gacgtggtcaagcgcgcgctgcaaggcgtccgcggcgtcgcacaggtcgagcgtatcggc
ggtgtcgagcgcgagatcctggtctcgctcgacccggaccggttgcaggcaatgggcctg
accgcggtcaatgtcagccagagcctgcgcggcaccaatgtcgacgtcgccggtggccgg
gccgagatcggcaagaacgaccaggcgatccgcacgctcgcgggtgccaagacgctcggc
gacctcgccggcacgatgatcccgctgttcggcggcggcgaggtccggcttgacgacctc
ggcaccgtcaccgacaccatcgccgaccgccgcaccttcgcccgcttcaacggcgagccc
atcgtcgcgctcggcatcaagcgctccaagggcgccagcgacgtgaaggtggctgaggcc
gtgcagaagcgcatcgacgcgctcaaggccgcctatcccgacgtcgacctgaaggtgatc
gacacctcggtcgaatacaccaacggcaattaccacgcggcgatctcgaccctgttcgag
ggcgccatcctcgccgtcgtcatcgtgctattgttcctgcgcgacctgcgcgccacgatc
atcgccgcggtctcgctgccgctgtcgatcttcccggcattctgggcgatggacctgctc
ggcttctcgctgaacctcgtcagcttcctcgccatcacgctgtcgaccggcattctggtc
gacgacgccatcgtcgagatcgagaacatcgtacggcacatgaacatgggcaaatcgccc
tatcgcgccgcactcgaagccgctgatgagatcggcctcgccgtgatcgcgatttcgctg
accatcatcgcgatcttcgcgcccgcgagcttcatgtcgggcatcgccgggcaattcttc
aagcagttcggcatcaccgtttcggtgcaggtgttcttctcgctgctcgcggcgcgattc
gtcacgccggtgctggcggcgtacttcctcaaacacggccaacacgaagagccgccacca
ggccgcgtgctgcgagcctaccacgggatcgtggcctggtcggtgaaacactacttcatc
acggtgctggtcggcctcggcgtcttcgccgcctcgatctggagcatcacgctgctgccg
cagggcttcctaccggcgcaggacagtgcccgctcgctgctcgctctcgagctgccgccg
ggcactcagctcgcctacaccgaaaaggtcaccgaggacatcgtcgcgcgcctgcgcaag
cggcccgaggtgaagagcatcttcgtcgacggtgggcgcgtgccgccgggcacccaggaa
gtccggcgcgcgtctctgatcatcaactacacgcccaaggacgatcgcgacatcacccag
cgcgagctcgaatcctcgatcagccaggaattggagaacgttcccgacatccgcttctgg
ttcctcgacgagaacggcctgcgcgccatctcgctggtcgtgaccggcgtcgatgccaac
atcgtcaacaatttcgcgagcgagctcgcgacgcagatgaagcggattccgaccatctcg
aacgtgatctcggaaaccacgctggagcggcccgagctgcgcgtcgaaccgcgcgccgat
ctcgccgcacggctcggggtctcgaccgaaagcctgtcgcagaccatccgcgtcgccacc
atcggcgacgtcggccccgcgctcgccaagttcgacgtcggcgatcgcctggtgccgatc
cgcgtgcagctcgaggatgccgcgcgcggcaatctcaagacgctcgagcagctccgcgtg
ccgctgggcgagcgcggcgagaagggcggcgtgccgctctcggtcatcgccgacgtcaag
ctcgatcagggcccgaccagcatcaaccgctacgatcgtgaacggcaagcgaccgtcgcc
gccgatctcgtcggctctgccgcgctcggcgacgccaccaagaaaatcaacgacctgccg
gtgatgaagagccggccgaagggcgtaaaggtctcaccctcgggcgacgccgaaagcctc
aacgagctgtccgacggctttgcgaccgcgatcaccgccggcctgatgatggtctatgcc
gtgctggtgctgctgttcggcaccttcctgcagccgatcaccatcctgttctcgctgccg
ctctcgatcggcggcgcgatcgcggccctcctcctcaccggcaaacagctcacgacgccg
gtgtggatcggcatcctgatgctgatgggcatcgtcaccaagaatgcgatcatgctggtg
gagttcgccatcgaggccatcaaggccggcaagcctcgcgaggaggccatgatcgatgcc
ggcatgaaacgcgcccgcccgatcgtgatgaccacgatcgcgatggccgcgggcatgatc
ccgagcgcgctcgcagtgggcgccggcggcgagttccgctcgccgatggcgctcgcggtg
atcggcggcctgatcttctcgaccatcctgtcgctggtgttcgtgcccgcgatgttcatg
gtgatggacgatttcggcgccctgatctggcgcttcgccaagcggctgatcgtgcacagc
gaggacgctgagattgacggtcatcaggctccggcggaagcggcaccggcgagcgtctca
cgccccgcggcggagtag
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