Entry |
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Name |
(RefSeq) protein SIEL isoform X1
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KO |
K13141 | integrator complex subunit 4 |
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Organism |
bdi Brachypodium distachyon (stiff brome)
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Brite |
KEGG Orthology (KO) [BR:bdi00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:bdi03041]
100822925
Spliceosome [BR:bdi03041]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
100822925
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
1:65186561..65193214
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AA seq |
803 aa
MDGSLASSDPGPSFAKPPGSSGDSGPCASRSSGPGPEVEVRALVSMAGGLYPLARAEALR
GLAAVVEKVGTSGGAVECCYGCAVELLRDEDQSIRLAAVRLIGLCAEKFAGREEVSGIGN
GDQMDLIFLQLSSTARDMCMQVRIEAFNGLAKMQRVSEGVLLQSLSKKVIRTDTGSGSIC
KANKLPPKLIFPCAAGIFAHGIEDEFYQVRIAACKTLGALAKFSGQYAQKALDLLMDMMN
DDTEAVRLQTLQTLFNMATYGYLSVQEKHMHMFLATLIDANAIVRNAARKILGLVNLPKL
QMFRSALDGLITSLEKNPEEQDIYSILFSIGKNHGSFSANVAKHLAKEISTAPNGELILD
KHRIQALLIVSISAPVSADKHKKLDIPSVIFSHAIPLLGRISSALGEDIIKDLSYLCHPS
GMPFAEKGLMSGEGGRSEFWSVETMRGTHALIEKTRKETNCSDEVLIMGSMRLMLETVEE
TWAMRESCGIEEIRTILRTCKEEVKVFAIKSSGSTGAFLSFLCDYLDAIRCIVEIRQLIQ
LENSYAIGPTSLDILLEKLDTYVRRMKCCYTGLNRELEVQVLELVLLANLFRLSKFGVCS
KLMLDKLHWIINQLDGLCADGSCEFSDFSNTVKQTFDANVIDGTLVVDICNFLKIFRLKP
AKDFGMLNAASAVLQVLGNNSENPLPYICGLPVGVSFDISLSNISGHDRIWIRMNSGQSI
QHAFLELSCFEGNDEVKSCSTVIPFYATPLACSFVLRVCLVIECPSGSICTHYEEHGGPR
DSVVQLCDELNVYLVSTDTECKN |
NT seq |
2412 nt +upstreamnt +downstreamnt
atggacgggagcctcgcttcgtccgatcccggcccgtccttcgccaagccgcctggcagc
tcgggggactcggggccgtgcgcatccagaagctcgggccctggtcccgaggtggaggtc
cgagctctcgtatcgatggccggcggactctacccgttggctcgggcggaggcactgcgt
ggcctcgctgcggtcgtcgagaaggtggggaccagtggtggggccgtggaatgttgctac
ggctgcgcggtggagttgctgagggacgaggaccagagtatcaggttggccgccgtgcga
ttgattggtctatgtgcggagaagtttgctggacgagaggaagtgagtggcattggcaat
ggtgaccaaatggaccttatttttctacagcttagctccacagctagggatatgtgtatg
caagtgagaatcgaagcattcaatggacttgctaaaatgcagagagtatccgagggtgtt
ttgcttcagtcattgtctaagaaggtcataaggactgacactgggagtggctctatctgc
aaagcgaacaaactaccccctaaactaatatttccttgtgctgctggcatttttgcacat
gggattgaagatgagttttatcaggttcgaatagctgcctgtaaaacattgggagcactt
gcaaagttttcaggccaatatgcgcagaaggccttggacttgttgatggacatgatgaac
gatgacacagaagcagttagattgcagactttgcagacactatttaatatggcaacatat
ggatatttgagtgtgcaggagaagcacatgcatatgttccttgccacattgattgatgcg
aatgccatagtgcgaaatgcagcacgcaagatcctagggttagtgaatctgcctaaactt
caaatgtttagatctgcacttgatggtctcattacaagtttggagaaaaatccggaggaa
caagatatatacagcattctgttttccattgggaagaatcatgggagcttttcagccaat
gtagctaaacatttagccaaagagatcagtacagcacccaatggagagctaatcttggat
aaacataggatccaggcattgttaatagtgtctatctcggcacctgtttctgctgataaa
cacaagaaattagatataccttcggttatattttcacatgcaattcccttacttgggagg
atctcatctgcattaggagaagatattataaaagacttatcctacttgtgtcatccaagt
gggatgccttttgcagagaaagggttaatgtctggagaaggtggaagatctgagttctgg
agtgttgaaactatgagggggactcatgctctgatagaaaaaaccagaaaggaaactaat
tgctcagatgaagtgctgataatgggatcgatgaggctgatgctagaaacagttgaagaa
acctgggccatgagagaatcatgtggtatagaagaaattcgaactattctgagaacatgc
aaagaagaagtcaaggtatttgctattaagtcttctgggtcaactggtgcattcttgagc
tttctatgtgactatcttgatgccatacgatgcattgttgaaatacggcagttgattcaa
ttggagaattcttatgctattggccctacttcacttgatattttgctagagaagttagat
acatatgtgagaaggatgaaatgttgttacactggattgaacagagaactggaggttcaa
gttttggagcttgttctcttagctaatttgtttagactctcaaagtttggagtatgttca
aaattaatgctggataagttgcattggataatcaaccagttagatggtctatgtgctgat
ggatcctgcgagttttctgacttcagcaacacagttaagcaaacatttgatgccaatgtt
attgacggtactcttgttgtggatatttgcaattttcttaaaatcttccgtctaaaacca
gcaaaagattttggaatgcttaatgctgcaagtgccgtgttgcaagtcttgggtaataat
tctgaaaatccgttaccatacatttgtggattacctgtgggtgtaagctttgacatatct
ctatcaaatatctctggtcatgatagaatctggatccgcatgaattctggtcagtcaatc
caacatgccttcttagagttatcctgttttgaaggcaatgatgaggtcaagagctgctct
acagtaattcctttctatgctactccattggcgtgttcatttgttctgagggtatgtttg
gtaattgaatgcccatctggaagtatctgcacacactatgaagaacatggagggccaaga
gatagtgtagtccaactctgtgatgaattaaatgtataccttgttagtactgatacagag
tgcaagaattaa |