KEGG   Brachypodium distachyon (stiff brome): 100826136
Entry
100826136         CDS       T01717                                 
Name
(RefSeq) RING-box protein 1
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
bdi  Brachypodium distachyon (stiff brome)
Pathway
bdi03420  Nucleotide excision repair
bdi04120  Ubiquitin mediated proteolysis
bdi04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:bdi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    100826136
   04120 Ubiquitin mediated proteolysis
    100826136
  09124 Replication and repair
   03420 Nucleotide excision repair
    100826136
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:bdi04121]
    100826136
   03400 DNA repair and recombination proteins [BR:bdi03400]
    100826136
Enzymes [BR:bdi01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     100826136
Ubiquitin system [BR:bdi04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   100826136
  Multi subunit type E3
   SCF complex
    Ring finger protein
     100826136
   Cul2 complex
     100826136
   Cul3 complex
     100826136
   Cul4 complex
     100826136
   Cul7 complex
     100826136
   Cul8 complex
     100826136
   Cul9 complex
     100826136
DNA repair and recombination proteins [BR:bdi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      100826136
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      100826136
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4 zf-C3HC4_2 zf-RING_11
Other DBs
NCBI-GeneID: 100826136
NCBI-ProteinID: XP_003570204
UniProt: C3SA59
LinkDB
Position
3:53495901..53499104
AA seq 116 aa
MDQGDVAVAVPPAAASPSCAGAGCKKGKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDL
CIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH
NT seq 351 nt   +upstreamnt  +downstreamnt
atggaccagggcgacgtcgccgtggccgtgccccccgccgctgcctccccctcctgcgcc
ggcgccgggtgcaagaagggcaagcgcttcgaggtcaagaagtggaacgccgtcgcgctc
tgggcctgggacatcgtggtcgacaactgcgcaatctgccgcaaccacattatggacctc
tgcatcgagtgccaggcgaaccaggccagcgccaccagcgaggagtgcaccgtcgcttgg
ggagtttgcaaccatgcattccacttccactgcatcagccgttggctcaagacccgtcaa
gtgtgccctctagacaacagtgagtgggagttccagaagtatggtcactag

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