Brachypodium distachyon (stiff brome): 100826136
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Entry
100826136 CDS
T01717
Name
(RefSeq) RING-box protein 1
KO
K03868
E3 ubiquitin-protein ligase RBX1 [EC:
2.3.2.32
]
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi03420
Nucleotide excision repair
bdi04120
Ubiquitin mediated proteolysis
bdi04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
100826136
04120 Ubiquitin mediated proteolysis
100826136
09124 Replication and repair
03420 Nucleotide excision repair
100826136
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bdi04121
]
100826136
03400 DNA repair and recombination proteins [BR:
bdi03400
]
100826136
Enzymes [BR:
bdi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.32 cullin-RING-type E3 NEDD8 transferase
100826136
Ubiquitin system [BR:
bdi04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
100826136
Multi subunit type E3
SCF complex
Ring finger protein
100826136
Cul2 complex
100826136
Cul3 complex
100826136
Cul4 complex
100826136
Cul7 complex
100826136
Cul8 complex
100826136
Cul9 complex
100826136
DNA repair and recombination proteins [BR:
bdi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
100826136
TCR (transcription coupled repair) factors
Cul4-CSA complex
100826136
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-rbx1
zf-ANAPC11
zf-RING_2
zf-C3HC4
zf-C3HC4_2
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
100826136
NCBI-ProteinID:
XP_003570204
UniProt:
C3SA59
LinkDB
All DBs
Position
3:53495901..53499104
Genome browser
AA seq
116 aa
AA seq
DB search
MDQGDVAVAVPPAAASPSCAGAGCKKGKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDL
CIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH
NT seq
351 nt
NT seq
+upstream
nt +downstream
nt
atggaccagggcgacgtcgccgtggccgtgccccccgccgctgcctccccctcctgcgcc
ggcgccgggtgcaagaagggcaagcgcttcgaggtcaagaagtggaacgccgtcgcgctc
tgggcctgggacatcgtggtcgacaactgcgcaatctgccgcaaccacattatggacctc
tgcatcgagtgccaggcgaaccaggccagcgccaccagcgaggagtgcaccgtcgcttgg
ggagtttgcaaccatgcattccacttccactgcatcagccgttggctcaagacccgtcaa
gtgtgccctctagacaacagtgagtgggagttccagaagtatggtcactag
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