Brachypodium distachyon (stiff brome): 100826734
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Entry
100826734 CDS
T01717
Name
(RefSeq) DNA repair protein RAD16
KO
K15083
DNA repair protein RAD16
Organism
bdi
Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bdi03400
]
100826734
DNA repair and recombination proteins [BR:
bdi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NER4 complex
100826734
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
zf-C3HC4_2
zf-C3HC4
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
zf-RING_2
Prok-RING_4
ResIII
zf-C3HC4_4
zf-RING_14
VGLL4
zf-Nse
zf-RING_6
zf-RING_Vps41
Motif
Other DBs
NCBI-GeneID:
100826734
NCBI-ProteinID:
XP_014752953
UniProt:
I1GU20
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All DBs
Position
1:complement(21506138..21513785)
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AA seq
861 aa
AA seq
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MPRRKGNASASGSRQRRRPDSDSDGDESVPSSDDTSDFEFVADLEEAADDADDFVSDEED
VAPAPAPAPALAVPRYVYVPPPPGQPARRRRAKARGRKKGKAADNRPPLPWEEWEEANEQ
WLDERIETADLEEADASHAPAALPAVPTAEPPPEVLLQLLRFQKEWLAWALAQEASVSRG
GILADEMGMGKTIQGIALVLTARQLRHPGSGPSSPPSLSLGLPIQRVGCTLVICPVVAVI
QWAQEIERHTAKGSARVLLYYGARRGSQKYDFDTYDFVVTTYSTIEADYRKHIMPLKIRC
EYCDKLFYPNKMKVHLTYYCGPDALRTEKQAKQMSKKWADKKGKGKRSGSKRKISAQEEE
EDNEELGESERQSRGRSPLHSVRWERIILDEAHFIKDRRCNTARAVFALESEYKWALSGT
PLQNRVGELYSLIRFLQVFPYSNYFCKDCDCKILDTNMKKQCDCGHSSVRHFCWWNKFIA
RPILYGGPEGRRAMILLKEKVLKGIVLRRTKKGRAADLALPPKIVTLRRDSFDRNEMEFY
EALYTQSCTQFDSYVDAGTLLNNYAHIFDLLTRLRQAVDHPYLVAFSKSAELREGYKNEG
NQTMESQCGICHDMAEDVVVTSCDHVFCKTCLIDYSATLGNVSCPSCSKPLTVDLTTKSS
KGKVPANLKGGKRSGILGRLQNLADFKTSTKIDALREEIRNMIEHDGSSKGIVFSQFTSF
LDLIEFSLQKSGVKCVQLNGKMNMSEKGRAIDTFINDPDCRIFLMSLKAGGVALNLTVAS
HVFLMDPWWNPAVESQAQDRIHRIGQFKPIRSVRFVIKDTVEERILQLQDKKRLVFEGTV
GDSPEAMSKLTEADLKFLFQN
NT seq
2586 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgccgaaaagggaatgcatctgcctctggcagccgtcagcgccgccggcccgac
tctgactctgacggcgacgagagcgtcccctcctccgatgacacctccgacttcgagttc
gtcgccgatttggaggaggcggcggatgacgccgatgattttgtctccgatgaggaggac
gtcgcgcccgcgcccgcgcccgcacctgcgctggcggttcctaggtatgtgtacgtgccg
ccacccccggggcagccagcgcggaggcgcagagcgaaggcgaggggcaggaagaagggg
aaggctgccgataacaggccgcctctgccatgggaggagtgggaggaggctaatgagcag
tggctcgacgaacgcatcgagacagcggacttggaggaggcagacgcctcccatgcgccg
gcggcgctgccggccgttcccacggcggagcctcccccggaggtgctgctccaactgctg
cgcttccagaaagagtggcttgcgtgggcgctggcgcaggaagcatcggtctcgcgcggc
ggcatcctcgccgacgagatggggatggggaagaccatccagggtatcgcgctcgtcctc
accgcgcgccagctccgccacccgggctcgggcccatcctcgcctccctcgctttcactg
ggcctaccgatccagcgggttggctgcaccctggtgatctgccccgtggtggccgtcatc
cagtgggcgcaggagatcgagcggcacacggccaaaggcagcgctcgtgtgctgctgtac
tatggtgcccgacggggctctcagaagtatgattttgacacctatgacttcgtggtcacc
acatactctaccattgaggcagactaccggaagcacatcatgccactcaaaattcggtgt
gaatactgcgataagctgttttaccccaacaagatgaaggtgcacctgacatattactgt
ggacctgatgccctgcgcactgagaagcaggcgaagcaaatgagcaagaagtgggctgac
aagaaagggaaggggaagagaagtggttctaagagaaaaattagtgcccaggaggaggag
gaagataatgaggaactgggggaatcagaaagacaatctaggggccgatcgcctttacac
tcggtgcggtgggagcggattatcttggatgaggctcacttcataaaagatagacgatgc
aatactgcaagggctgtttttgctttggagtcagaatacaagtgggctctgagtggaaca
ccattgcagaatcgcgttggagaactttactcactgattcgcttcttgcaagtcttcccc
tactcaaactatttctgcaaggactgtgactgtaagatactagataccaatatgaagaag
caatgcgactgtggtcactcgtctgttaggcacttttgctggtggaataagttcatagca
agaccaatactatatgggggtcctgagggccgaagagccatgattcttttgaaggaaaaa
gtcttgaagggcatagtgttaaggcggacgaaaaaaggccgagctgcagatcttgctctt
ccgccgaagattgtgacattgaggcgggactcatttgatagaaatgaaatggagttttat
gaagccttatatactcaaagctgcacacagtttgattcgtatgttgatgctggaacgctg
ctaaacaactatgctcatatttttgatctcctcacaaggttgagacaggccgtcgatcat
ccataccttgtagcattttctaagtcagccgaacttcgtgaaggatacaaaaacgaagga
aatcagaccatggaaagccaatgtggtatatgtcatgatatggcagaagatgtggtggtt
acctcttgtgatcatgtattctgcaagacttgtttgatagactactccgcaactttgggg
aatgtttcatgtccatcttgttcaaaaccccttactgttgacctaacaacgaaaagctca
aaaggaaaggtccctgcaaatttgaagggaggcaaacgctcaggaatattagggagacta
caaaaccttgcagattttaagacaagtacaaaaattgatgctttgagagaagaaataaga
aacatgattgagcatgatggttcctcaaaagggattgtttttagccagttcacatcgttc
ttggatctgatagaattctctctacagaagtctggcgtcaagtgcgtgcaacttaatggg
aaaatgaacatgtctgagaaggggagagctatagacaccttcataaatgacccagattgc
aggattttcctaatgagcctgaaagctggaggagtagctctgaatcttactgtagcatct
catgttttcttgatggacccttggtggaatccagcagttgagagccaagcccaggatcgg
atccaccgaatcggacaattcaagcctatcagaagcgtgaggtttgtgatcaaggacact
gttgaagagcgcatcctgcaactgcaagataagaagcgacttgtgttcgaaggcaccgtt
ggtgactccccggaggccatgtctaagcttacagaggctgacctgaagttcctgttccag
aactga
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