Brachypodium distachyon (stiff brome): 100831583
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Entry
100831583 CDS
T01717
Name
(RefSeq) transcription factor PIF5 isoform X1
KO
K16189
phytochrome-interacting factor
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
100831583
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bdi03000
]
100831583
Transcription factors [BR:
bdi03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
100831583
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Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
bHLH_NPAS4
Motif
Other DBs
NCBI-GeneID:
100831583
NCBI-ProteinID:
XP_024313341
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Position
1:complement(4565876..4570452)
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AA seq
418 aa
AA seq
DB search
MDSNARSAASQKKPIVMDTTDLVELLWHNGGVVAHSQRPAAPNPSAAAAADHGGQSTSGL
TGEETAAWFPDAALEDDDMYAQLWHSVTTAPDGGGLPAGPSSRPPPGDLAHQTAAAARPP
MSSSWTGDLCSTFCGSNQGPVVPAGGGEGSAALPSEGTRGTSTRDGAGTFTGTSSSGGSG
SNFGASGLPSESTHGGHKRKGRGRDDSDSRSEDAEFEATEETKSSRRHGSKRRSRAAEVH
NQSERRRRDRINEKMRSLQELIPHCNKADKASILDEAIEYLKSLQMQLQIMWMTTGMAPM
MFPGAHQFMPPMAMGMNSACMPAAQGLNQMSRVPFINHSLPNHIPMNSSPAMNPMYVANQ
MQNIHLREASNHFQVAPQVTGPYAYASQVAQQNQIPEVPDSTVVPTSGAGQPPTSDGI
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atggacagcaatgcgagatcggcggcgagtcagaagaagcccatcgtcatggacaccacc
gacctcgtcgagctgctctggcacaacgggggcgtcgtcgcgcactcccagagaccggcg
gcgccgaacccctccgccgccgccgccgccgaccacgggggccagagcaccagcgggctc
accggggaggagaccgccgcatggttcccggacgccgccctcgaggacgacgacatgtat
gcgcagctctggcacagcgtcacgactgccccggacggcggcgggctcccggcggggcct
agctctcgccccccgccgggggacttggcgcaccagacggcggcggcggcgaggccgccg
atgagctcgagctggaccggcgacctctgctcgaccttctgcggcagcaaccagggcccc
gtggtgccggcggggggcggggaggggagcgcggcattgccgtccgaggggacgcgcggg
acgagcacgcgcgatggcgccggcacttttaccggcacctcctcctccggtggatccggg
agcaacttcggggcctccggcttgccgagcgagagcacccatggtggtcacaagaggaag
gggaggggcagagacgactcggatagccgcagtgaggatgccgagtttgaggcgactgag
gagaccaagtcgtcgaggcggcatgggtccaagcggaggagtagggcagctgaagttcat
aaccagtcagagaggagaaggagggaccggatcaacgaaaagatgcgctcactacaagaa
ctcataccccattgcaacaaggccgataaagcatcgatattagatgaggcaattgagtac
ttgaagtccctccaaatgcaacttcagattatgtggatgactaccggaatggcaccaatg
atgtttcctggtgctcaccaattcatgccaccaatggctatgggcatgaattctgcatgc
atgcctgcggcacagggtctaaatcagatgtcaagagtgccattcatcaaccattccttg
ccaaatcacatccctatgaattcatctccagcaatgaaccctatgtatgttgcaaaccag
atgcaaaacattcatctgagggaggcaagtaatcacttccaagtggcgcctcaggtaaca
gggccatatgcttatgcgtcacaagtagcacaacaaaaccagatcccggaagtaccagat
agtactgttgtgccaacttctggggccggacaaccacctacctctgatggaatttag
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