Brachypodium distachyon (stiff brome): 100833154
Help
Entry
100833154 CDS
T01717
Name
(RefSeq) isoleucine--tRNA ligase, cytoplasmic
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
100833154
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
bdi01007
]
100833154
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bdi03016
]
100833154
Enzymes [BR:
bdi01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
100833154
Amino acid related enzymes [BR:
bdi01007
]
Aminoacyl-tRNA synthetase
Class I (U)
100833154
Transfer RNA biogenesis [BR:
bdi03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
100833154
Prokaryotic type
Other AARSs
100833154
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
DUF5915
Anticodon_1
tRNA-synt_1g
tRNA-synt_1e
Motif
Other DBs
NCBI-GeneID:
100833154
NCBI-ProteinID:
XP_003563308
UniProt:
I1GVG9
LinkDB
All DBs
Position
1:25949406..25963230
Genome browser
AA seq
1172 aa
AA seq
DB search
MEDVCEGKDFSFPAEEERVLKLWAELDAFHEQLRRTEGGEEFIFYDGPPFATGLPHYGHI
LAGTIKDVVTRHQSMRGRHVARRFGWDCHGLPVEFEIDKQLGITNRQQVLDYGIARYNEA
CRSIVTKYVKEWEAVVTRTGRWIDFKADYKTMDINFMESVWWVFGQLWAKDLVYKGFKVM
PYSTGCKTALSNFEAGLDYRTVPDPAVMVSFPVVSDVDNAALVAWTTTPWTLPSNLALCV
NANLVYSKVKDKSNGTVYIVAESRLGQLPVKAKASGKKQAPPKGSTPDGGQGGLDTESYE
LLAKFPGSCLVGLKYTPLFDFFLEFKETAFRVIADNYVTDDSGTGVVHCAPAFGEDDHRV
CLAAGIIEASGLVVAVDDDGCFIEKITEFRGRHVKEADKDIISAVKDKGRLVSKGSIEHS
YPFCWRSGTPLIYRAVPSWFIKVEKIRDQLLECNKETYWVPDYVKEKRFHNWLEGARDWA
VSRSRFWGTPLPVWISQDGEEIVVMDSIEKLEKLSGVKVTDLHRHHIDDITIPSSRGPEF
GVLKRVEDVFDCWFESGSMPYAYIHYPFENRELFEKNFPGNFVAEGLDQTRGWFYTLMVL
STALFGKPAFKNLICNGLVLAEDGKKMSKSKQNYPSPVGVINEYGADALRLYLVNSPVVR
AESLRFKRIGVYGVVKDVFLPWYNAYRFLVQNTKRLEVEGLAAFSPIDQDSLRKSSNVLD
HWIHSATESLVSFVHQEMDAYRLYTVVPYLVKYIDNLTNIYVRFNRKRLKGRTGEEDCRI
SLSTLYHALVTTCVVMAPFTPFFTEALYQNLRKVSSKSEESIHFCTFPSTTGERDERVEQ
SVNRMMTIIDLARNIRERHSKALKTPLKEMVVVHPDNEFLEDITGKLKEYVMEEMNVKTV
TPCNDPMMYASLRAEPNFSVLGKRLGKDMGKVSNEVKKMSQEQILAFEQSGEISFHGHCL
KLDDIKVVRQFKRPADVSEKEIDAAGDGDVLVILDLRADQSLFEAGMAREVVNKIQKLRK
TAQLEPTDLIDVYYKSVNDDSNALEEIVQSQDQYIRDVLGNSLVPKAMAPSDMVVMCEES
HIVHDMSFVIYIARCIPVLTPELLPHASGNSDHVDALRVYLLSRSIYRLKNEFQTGNGKI
TVKCIEGYPPIDLHLGKHVFLSAGDFYQANRS
NT seq
3519 nt
NT seq
+upstream
nt +downstream
nt
atggaggacgtgtgcgaggggaaggacttctccttcccggcggaggaggagcgcgtcctc
aagctgtgggcggagctggacgccttccacgagcagctccggcgcacggagggcggcgag
gagttcatcttctacgacggtccccctttcgccacgggcctcccccactacggccacatc
ctcgccggcaccatcaaggacgtggtcacgcgccaccagtccatgcgcggccgccacgtc
gcgcgccgcttcggctgggactgccacggcctccccgtcgagttcgagatcgacaagcag
ctcggcatcaccaaccgccagcaggtgctcgactacggcatcgccaggtacaacgaggcc
tgccgcagcatcgtcaccaagtacgtcaaggagtgggaggccgtcgtcacgcgcacgggg
aggtggattgacttcaaggccgattacaagaccatggacatcaacttcatggagagcgtc
tggtgggtcttcgggcagctctgggccaaggacctcgtgtacaagggcttcaaggtgatg
ccttacagcactggttgcaaaactgctctgtcaaacttcgaggcaggactggactatagg
actgttccagacccagcagtgatggtgtctttccctgttgtcagtgatgttgacaatgca
gctctcgttgcctggactacgacgccttggacactcccaagcaacctagcattgtgtgtc
aatgccaatcttgtgtattctaaggttaaggacaagtccaatggaacagtatacattgtc
gcagaaagtaggcttggccagttgccagttaaagccaaagcttctggaaagaagcaagct
cctcctaagggaagcacccctgatggtggtcagggtggtttggacactgaatcatatgaa
ttattggcaaagtttcctggatcatgcttagtaggcctaaaatacactcctctgtttgat
tttttcctggagtttaaagagactgcgtttagggtgattgcggataactatgtaactgat
gacagtggaactggtgttgtccattgtgctcctgcatttggtgaagatgatcatcgtgtt
tgccttgctgctgggataattgaggccagtggacttgttgtcgctgttgatgatgatggt
tgctttatcgaaaagataactgagttcagagggcggcatgtcaaagaggctgacaaggat
atcatcagcgctgttaaggataagggaagacttgttagtaaagggagcatcgagcactct
tatccattttgttggcgctcgggtactcctcttatctaccgggctgttccaagctggttt
atcaaggttgaaaagattagagatcagttactggaatgtaacaaggagacctactgggtt
ccagattatgtcaaggaaaagagattccataactggctagaaggtgctagggactgggct
gttagcagaagtagattctggggtactccacttccagtgtggatcagccaagatggtgaa
gaaattgtagtcatggattccatcgagaaacttgaaaaattatctggtgtcaaggttacc
gatcttcatcgccaccatattgatgatattacgattccctctagcagaggaccagagttt
ggggtgctcaaacgtgttgaggatgttttcgactgctggtttgagagcgggtctatgcca
tatgcctacattcattatccatttgagaaccgggaactatttgagaagaattttcctggc
aattttgtggcagagggcttagatcaaacacgcggatggttttacactttgatggtgtta
tcaacagcattatttgggaagcctgcttttaagaatcttatatgcaatggtcttgttttg
gccgaggatggtaagaaaatgagcaagagcaaacagaattacccttcacccgtaggggtc
attaatgaatatggagcggatgctttgaggctgtatttagtaaattctccagttgtgcgt
gcagaatctctacgatttaaaaggataggtgtttatggtgttgtgaaagatgtctttctc
ccgtggtataatgcttatagattccttgtccaaaacacaaagagacttgaagttgagggt
cttgcagcattttctccaattgaccaagattcacttcggaagtcatctaatgtgttagat
cactggatacactctgcaactgaaagtctggttagctttgttcatcaggagatggatgca
tatcggctttacacggttgtgccatatttggtaaaatacatcgataatcttaccaatata
tatgtgcggttcaaccgcaaacggttaaaaggacgcactggagaagaagactgcagaatt
tctctttcaactctgtaccatgcactcgtgacaacttgtgtggtgatggctccatttacg
cccttctttactgaagctctttatcaaaatctgcgaaaggtgtcgagtaaatcagaggag
agcattcacttttgcactttcccttccaccactggggagagagatgagcgtgttgaacaa
agtgtaaataggatgatgaccatcattgatcttgcgcgcaatattcgggaacggcatagc
aaagctctcaaaacgccactgaaggagatggtggttgttcatcccgacaatgaatttctt
gaagacatcactggcaaactaaaagagtatgtcatggaggagatgaatgtcaagactgtt
actccatgtaatgatcccatgatgtatgcttctctacgggcagaacccaattttagtgtg
ctaggcaaaagactgggaaaagacatgggcaaagtgtccaatgaagtgaagaaaatgtct
caggaacaaatcttggcatttgagcaaagcggagagatttcgttccatggtcattgcttg
aagctagatgacattaaggtggttcgacagttcaagcgtcctgcagatgtgtcagagaag
gaaattgatgccgcaggagatggtgacgtgttagtcattttggatcttagagccgatcaa
tcgttgttcgaagctggcatggcccgagaggttgtaaacaaaatccagaaattgcggaag
actgctcagctagaacctacagatttaattgatgtatactacaaatctgtgaacgacgac
agcaatgcactcgaagaaattgtgcagtcgcaggatcagtatattagggacgtgcttggt
aattccctagttccaaaggcaatggcaccatcagatatggttgtcatgtgcgaggagtct
cacattgtacatgacatgtcgtttgtcatctacattgcaaggtgcatccctgtgctcaca
cctgagctccttccccatgcctcaggcaacagtgaccatgttgatgcgttaagggtgtat
ttgttgtcaagatccatttacagattgaagaacgaattccagactggaaatggcaagatt
actgtcaagtgcattgaaggctacccaccaattgatctgcatctaggaaaacatgttttt
cttagtgcaggtgatttctatcaggctaatcgttcttga
DBGET
integrated database retrieval system
