Brachypodium distachyon (stiff brome): 100839865
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Entry
100839865 CDS
T01717
Name
(RefSeq) DNA polymerase kappa
KO
K03511
DNA polymerase kappa [EC:
2.7.7.7
]
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
100839865
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bdi03400
]
100839865
Enzymes [BR:
bdi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
100839865
DNA repair and recombination proteins [BR:
bdi03400
]
Eukaryotic type
TLS (translesion DNA synthesis) factors
Y-family DNA polymerases
100839865
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IMS
IMS_C
zf_UBZ
IMS_HHH
Orbi_VP5
Motif
Other DBs
NCBI-GeneID:
100839865
NCBI-ProteinID:
XP_010232641
UniProt:
I1GQA8
LinkDB
All DBs
Position
1:complement(11620062..11627756)
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AA seq
672 aa
AA seq
DB search
MSSAAGAPSDGGGDRPWQSYHTAYTNGKAGMEGVDKEKVQKVIYEMSKGSKYFENEQKKE
AITKQKIEHLRAQCAKLNDNDISHFQKVAEKKILELEASRDLSKIWLHTDMDAFYAAVEI
LENPSLKGKPLAVGSMSMIATASYEARKFGVRAAMPGFIGCKLCPDLVFVRPNFERYTHY
SELARKVFQRYDPNFFATSLDEAYLNITEVCIERGITGEEVASELRGAIHQETGLTCSVG
VAPNRMIAKVCSDINKPNGQFILPNERDAVTTFVSTLPIRKIGGIGKVTEQMLHQVLGIT
TCQQMLQKAAFLCALFSEGSTDFFLSVGLGLGGTETPEHRLRKSMSCERTFSATNDYSLQ
FEKLDNLAENLADDLQKECLKGRTLTLKLKTAAFEVRTRAATAQSYISSKEDILICAKKL
LKAELPLSLRLMGLRMSHLCGEKDDPTIPTQKTLDRFFRLSDNNSNVNRTNGASSNDASG
GDDCNIGATTKDECLIHDAVTDISSDQHTFFSNDENIFVPEERSSVNYDNEVVSSNLLTC
DDLGGTKLDGNTSNSKVTQSEKFDDLSHFTSCKASASSSKPNQQFWVDGYICSLCGFELP
PCFEEERQEHSDFHLAELLQQEEALDSSGHLTKERLAERQSTTPTPKKKLKSSKEGKHIP
IDSFFLKHNKKL
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtccgcggcgggggcgccatcggatggcggaggagataggccgtggcagtcatac
cacaccgcgtacaccaacggcaaagccggaatggagggagttgacaaagagaaggtgcag
aaggtaatttatgaaatgagcaagggttcaaaatatttcgaaaatgagcagaagaaggag
gcaattaccaaacaaaaaattgaacatctgcgtgcacagtgtgcaaagctaaatgacaat
gacatatcacattttcagaaggttgctgaaaagaaaattttagagttggaagcttcacga
gatctttcaaagatctggcttcacactgacatggatgctttctatgctgctgttgagata
ttggaaaatccatccttaaaggggaaaccgttggcagtaggtagcatgtctatgatagct
accgctagttatgaggcacggaaatttggagttcgtgcagcaatgcctggttttattgga
tgtaaactgtgtcctgacttggtttttgtgcgtccaaattttgagagatacactcattac
agtgaattagcaagaaaagtttttcagaggtatgatcccaacttctttgcaacaagtcta
gatgaagcatacctcaatattacagaagtctgcatagagagaggcattacgggtgaggag
gttgcctctgagcttaggggtgccattcaccaagaaactggtctaacatgtagtgttggg
gttgctccgaaccgcatgattgcaaaggtttgctctgatattaacaagcctaatggacaa
tttattctgccaaatgaacgggatgctgtgacgacatttgtatcaaccttacctataaga
aagataggtggtataggtaaggtaacagaacagatgctacatcaggttcttggaattact
acatgccagcagatgctacaaaaggctgctttcttatgtgctcttttttctgaaggctcc
actgatttctttctttcggttggccttggattaggaggtacagaaactcctgagcatagg
ctaagaaaaagcatgagttgcgagcgaactttctctgcgacaaacgactattctttgcag
tttgagaagttagataatctcgccgaaaatttagctgatgacctgcaaaaggagtgcttg
aagggaaggacgctaacactgaaactaaagactgcagcttttgaggttaggacgcgagca
gcaactgcacaaagctacatcagctccaaggaagacatcctgatttgtgctaagaagttg
cttaaggctgaactgcctctttctttaagattgatggggttgcgcatgtctcacctttgt
ggcgagaaggatgatccaactatcccaacacaaaagacactagatcggttttttcgtttg
tcagataataactcgaatgtcaaccgaacaaatggtgcaagttccaatgatgcctcagga
ggggatgactgtaatattggtgcgacaacgaaggatgagtgtttgatacatgatgctgtt
actgatatctccagtgatcaacatacattcttctcaaatgatgagaacatatttgttcca
gaagaaaggagctcggtcaattatgataatgaggttgtctcaagcaacctacttacttgt
gatgatttaggtggaacaaaattagatggcaacacttccaattcgaaggttacacagagt
gagaagtttgatgatctgagccacttcaccagctgcaaagcttctgcttcatcgagcaaa
cccaaccagcaattttgggtagatggctacatttgttccctctgtggattcgaactacct
ccgtgttttgaggaggaaaggcaagaacattcagacttccacttggctgaactgttgcaa
caggaagaagcattagacagcagcgggcacctcacaaaggaaaggttggctgaaaggcag
tctactacacccacacctaagaagaaactgaagtcatccaaagaaggaaaacatatacct
attgattctttcttcctaaagcataataagaagttgtaa
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